Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is artJ [H]
Identifier: 13470758
GI number: 13470758
Start: 404013
End: 404798
Strand: Direct
Name: artJ [H]
Synonym: mlr0549
Alternate gene names: 13470758
Gene position: 404013-404798 (Clockwise)
Preceding gene: 13470757
Following gene: 13470759
Centisome position: 5.74
GC content: 61.32
Gene sequence:
>786_bases ATGCGTATTGCACTGCGTATCGCGCTCGCCGCATCGGCTGCGCTGCTGACGCTCGGCGTCGCCCAGGCCCAGGAAAAGAC CCTGCGGATCGGCACCGAAGGCGCCTATCCCCCGTTCAACAACCTCACCTCCGACGGCAAGCTCGTCGGCTTCGATATCG ACATCGCCCAGGCGCTTTGCGATCAGATGAAGGTGAAGTGCACCTTCGTCGCCCAGGATTGGGACGGCATCATCCCGGCA CTTCAGGCCGGCAAGTTCGACGCCATCGTCGCTTCGATGTCGATCACGCCTGAGCGCAAGGAGAAGGTCGACTTCACCCA CAAATACTACAACACACCCTCGGCTCTCGCAGTGCCGAAAGACAGCACGCTGAAGGGCGTGACCAAGGCAGATCTCGCCG GCAAGACCATCGGCGTCGCCACGACGACCACCCATTTCAACTATGCCTCGAAGACCTACACCGACAGCACCGTGAAGGGC TATCCGAGCAGCCCCGAGGAGCAGGCAGATCTGGCCAATGGTCGTCTGGACGCCATCGAGGACGATATCGTCGTGCTCCA GCAGTGGCTGGACTCGCCTGATGGCGCCTGCTGCAAGATTCTCGGCCAGCCCTCGCCGCAACCGGTCGAGATCTTCGGGC CGGGCGCCGGCATAGCCGTGCGCAAGGGCGAGACCGATCTGGTCAACAAGCTCAATGAGGCCATCGACGCCATCCGCGCC AATGGAAAATACAAGGAAATCAACGACAAGTACTTCAAGTTCGACGTCTTCGGCGCCGAGTCCTGA
Upstream 100 bases:
>100_bases TCTTGGAAAGAATGGGAGTATCGCCTCAGCGGGCGGTCAAAAGCACCGCCCCATAGAGCCGTTTCGGAACGACGGTCGGG ACCATAAAGAGAGGACTATC
Downstream 100 bases:
>100_bases TAGACGGATCAAGACGGCGGGGAAATTCCCCGCCGTCTTTCTATTCATCTTGGAACGCCGTGGAGATAAGACCCGTCAAT GCCAGCCCAAAGCATATGGA
Product: amino acid ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRIALRIALAASAALLTLGVAQAQEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQMKVKCTFVAQDWDGIIPA LQAGKFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIGVATTTTHFNYASKTYTDSTVKG YPSSPEEQADLANGRLDAIEDDIVVLQQWLDSPDGACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAIRA NGKYKEINDKYFKFDVFGAES
Sequences:
>Translated_261_residues MRIALRIALAASAALLTLGVAQAQEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQMKVKCTFVAQDWDGIIPA LQAGKFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIGVATTTTHFNYASKTYTDSTVKG YPSSPEEQADLANGRLDAIEDDIVVLQQWLDSPDGACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAIRA NGKYKEINDKYFKFDVFGAES >Mature_261_residues MRIALRIALAASAALLTLGVAQAQEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQMKVKCTFVAQDWDGIIPA LQAGKFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIGVATTTTHFNYASKTYTDSTVKG YPSSPEEQADLANGRLDAIEDDIVVLQQWLDSPDGACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAIRA NGKYKEINDKYFKFDVFGAES
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=247, Percent_Identity=39.2712550607287, Blast_Score=177, Evalue=7e-46, Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=37.4501992031873, Blast_Score=167, Evalue=9e-43, Organism=Escherichia coli, GI1788648, Length=237, Percent_Identity=37.5527426160338, Blast_Score=165, Evalue=3e-42, Organism=Escherichia coli, GI1788649, Length=236, Percent_Identity=37.7118644067797, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1788228, Length=232, Percent_Identity=31.0344827586207, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787031, Length=256, Percent_Identity=31.25, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28053; Mature: 28053
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALRIALAASAALLTLGVAQAQEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALC CEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHH DQMKVKCTFVAQDWDGIIPALQAGKFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPK HHHEEEEEEEECCCCCCHHHHHCCCCEEEEEEEECCCCHHHHCCHHHHHCCCCCEEECCC DSTLKGVTKADLAGKTIGVATTTTHFNYASKTYTDSTVKGYPSSPEEQADLANGRLDAIE CCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH DDIVVLQQWLDSPDGACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAIRA HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHC NGKYKEINDKYFKFDVFGAES CCCEEECCCEEEEEEEECCCC >Mature Secondary Structure MRIALRIALAASAALLTLGVAQAQEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALC CEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHH DQMKVKCTFVAQDWDGIIPALQAGKFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPK HHHEEEEEEEECCCCCCHHHHHCCCCEEEEEEEECCCCHHHHCCHHHHHCCCCCEEECCC DSTLKGVTKADLAGKTIGVATTTTHFNYASKTYTDSTVKGYPSSPEEQADLANGRLDAIE CCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH DDIVVLQQWLDSPDGACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAIRA HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHC NGKYKEINDKYFKFDVFGAES CCCEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]