Definition Methanococcus maripaludis C5 chromosome, complete genome.
Accession NC_009135
Length 1,780,761

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Identifier: 134046682

GI number:

Start: 1599609

End: 1603004

Strand: Direct

Name: Not Available

Synonym: MmarC5_1656

Alternate gene names: NA

Gene position: NA

Preceding gene: 134046680

Following gene: 134046683

Centisome position: NA

GC content: NA

Gene sequence:

>3396_bases
ATGCTCCATGTTTCAGCTTCAAAAGGAATGACTGAATATTTCAAAAATATTTTAGATAATGTAAAAAACCTTTACGATCT
TGCAGAGGGATGCAGGAAATCTGGATACGATGTAACAGACCACGTTGAGATACCTCTGGCAAAAGATATGGCAGATAGGG
TAGAGGGAATTGTCGGTCCAAAAAATGTTGCAGAACGTATCAGGGAACTAGTATCGGACTTAGGAAAAGAACCTGCGGCA
CTTGAAATTGCAAAAGAAATAGTTGAAGGAAAATTTGGTGAGTTCGGGCGAGAAGTTGGAGCAGAACAAGCCGTAAGAAC
AGCGTTAGCAGTTATCACGGAAGGAATCGTGGCAGCACCTCTAGAAGGTATCGCACACGTTAAAATTAAGAAAAACAACG
ATGGTGGTGAATATCTTGCAATCTACTTTGCAGGACCAATTAGGAGTGCAGGAGGAACTGCTCAGGCACTTGCCGTACTT
GTTGGGGATTACGTTAGAAAAAACATGGGATTAGATAAATTTAAGCCAACAGACGATGAAGTTGAAAGATACGGGGAAGA
AGTGGATTTATACCAGTCCGAGGTTACTACATTCCAATACCAGCCAAAAGCTGAAGAAATCCGGGTGGCCGTTAGAAATA
TATCTGTAGAAATTACTGGGGAGGCAACAGACGACGTTGAAGTTAGTGGACACAGGGATTTACCTAGAATAGAAACAAAC
CAGATTAGGGGCGGTGCTCTTTTAGCACTAGTTGAGGGTGTTCTTCTAAAAGCACCTAAAATTTTAAGACACGTTGATAA
ATTAGGCATTGAAGGATGGGACTGGTTAAAAGAGTTAAAAAGCAAAAAAGAAGAATTAGTCGAAGAAATTGAAGAAGAAA
ATGATGAATTTAACTACGAAGAGGAAGAAGACCTATCACAATACGAAGATTATGAAGTGGAGGCTGTAACCAAGTTTATT
GGGGAAGTTATTGCAGGAAGGCCTGTATTTTCACACCCCTCTAAAAAAGGCGGGTTCAGACTTAGATATGGAAGAAGTAG
AAATACAGGATTTGCTACAGATGGTTTTCACCCTGCAATAATGTATTTGGTTGACGACTTCATGGCTGTAGGAACGCAGT
TAAAAACCGAAAGACCTGGAAAAGCAACATGTGTAGTTCCTGTTGATAGTATCGAAGGTCCAATAGTTAAATTAAACGAT
AAAAGTGTACTTAAAATAGATACGGTCGAAAAAGCAAAACAATATCGGGATGACGTTGAAGAAATTCTCTTTTTAGGGGA
TATTTTGGTAAACTATGGGGATTTCTTGGAAAACAACCACACGATACTTCCAAGCAGTTGGTGTACCGAGTGGTATGAAA
AAATCTTAAAATCAGAAAATTTAGAATATACAAAAGAATTTATAGAAAATCCCGATCAAAAAGAAGTAGTAAAATATGCT
AAACTTACAAATACGCCACTTCATCCAAAATATACATATTTCTGGCACGATATTTCTAAAGATAATATCAATGTTCTTAG
AAACTGGATTATTGGTGGGAGATACAATGAAAGCAATGATTCTTGGGGATTGACATATGATCCAGAAGACCCAGAAATTT
CAATTGTAAAACGGTATTTGGAACTTATCGGATGTCCGCACACAGTAGTGGATGAAAAAGTAGAAATTTTCGAATATTAT
CCGTTATTATATTCATTAGGATATGATTTTGACGAGAAACAAGATGTTGTAGAAGATATCGAAGAAAAACTTCAAAATAC
GAAAAATAACATGCACTTTATAAATACAATAGCGCCATTTGAAATTCGAAGAAATGCTTACATATACGTTGGTGCAAGAA
TGGGTAGGCCAGAAAAGGCAGCTTCCAGAAAGATGAAACCACCGGTAAATGGTCTTTTCCCAATTGGAAATGCCGGGGCA
CTTGTAAGGCTTATAAACAAAGCTGTTGACGAGGGAAAAACTGACGAAATTGAAATTTCAAATGTAAAATGCAGCTGTGG
AAATGTAAGTTTGTACAGAACATGTCCATTTTGCGGAAGTTCTGTTGAACCAAGTGGACCTTCGCGAATAAAACTTCCAA
TAAAAGAATATTGGTACAAAGCGCTCGAAAATTTGAAGATAAACAAAGCTGGCGATGTAAAATGTATTAAGGGGATGACT
TCAAAGGATAAAATAATCGAACCCTTAGAAAAAGCAATATTGAGGGCAAAAAACGATATATTTGTATTTAAAGACGGCAC
TACAAGGTTTGACTGTACAGATGTTCCGGTAACTCATTTCAGGCCTGTAGAAATACACGGGGATATCGAAAAACTGAAAT
CTCTGGGATATTTGAAAGATATTCACGGAAATCCGCTTGAAAATGAAAATCAGGTACTCGAATTAAATGTTCAAGATGTC
ATAGTTCCTGAATCCTGCATGGATTACTTTTTAAATGTTTCAAAATTTATAGATGATCTTTTGGAAAAATACTACAAAAA
AGATAGATTTTACAACGTGAATAAAAGAGAAGAGCTTGTAGGGCATTTAATAATTGGAATGGCGCCACACACCTCCGCAG
GAATGGTTGGAAGGATCATTGGATACAGCAAAGCAAACGTAGGGTACGCTCATCCTTACTTCCATGCTTCAAAAAGAAGA
AACTGTGATGGGGATGAAGATGCATTTTTCCTACTTTTAGATGCATTCATGAATTTTTCAAAGAGATTCTTGCCAGATAA
AAGAGGGGGCCAGATGGATGCGCCACTGGTTCTTACAACCATTTTGGATCCGAAAGAGGTGGATGGTGAGGTCCATAACA
TGGATTCGATGTGGGAATACCCTCTTGAATTCTACGAAAAATCTCTGGAAGGAATTGCTCCAAAAGAAATCAAAAAAATA
ATGGAGACTGTTGAAGACAGGCTTGACAAAGAGAGTCAGTACGAAGGAATCGGATATACGCATGAAACTTTGAAAATAGA
TGAAGGGCCGCTTGTTTGTGCATACAAAACATTGGGTTCCATGATGGAAAAGACCTCAGCTCAACTCGCGGTTGCAAAAA
AGATTAGGGCAACTGATGAAAGGGATGTGGCGGAAAAGGTTATCCAATCGCATTTTGTTCCTGATTTAATTGGAAATTTA
AGGGCTTTTTCAAGGCAAGGAGTACGGTGTAAATGCGGTGCAAAATACCGAAGGATGCCTCTAAAAGGGATTTGTAGAAA
ATGTGGAAGCAGACTGATTTTAACAGTTTCAAAAGGGGCTGTTGAAAAGTACATGGACGTTTCACAAACAATGGCTGAAA
AGTACAATGCAAGCGACTACATAAAACAAAGACTCGAAATCATAAGGTCTGGAATTGACAGTTTGTTTGTAAACGACAAG
AGAAAGCAGGTTAAAATTGAAGATTTCTTTAAATGA

Upstream 100 bases:

>100_bases
TTGGCCATTATATATGTTCCACACAAATTGTTAAAACTATATATGCTTTCAAAACCTAAATCATCTAACTACTTTTAATC
TAACGTTAATCGTGATAATC

Downstream 100 bases:

>100_bases
TGGAATTATTTAGAAATTGATATATATCTGCATCCCATATTAATTTTGAAAAAAGAAGGTGATTTTTTATGATTGTAACA
ACAAGTGACAAAATCGAAGG

Product: DNA polymerase II large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1131_residues
MLHVSASKGMTEYFKNILDNVKNLYDLAEGCRKSGYDVTDHVEIPLAKDMADRVEGIVGPKNVAERIRELVSDLGKEPAA
LEIAKEIVEGKFGEFGREVGAEQAVRTALAVITEGIVAAPLEGIAHVKIKKNNDGGEYLAIYFAGPIRSAGGTAQALAVL
VGDYVRKNMGLDKFKPTDDEVERYGEEVDLYQSEVTTFQYQPKAEEIRVAVRNISVEITGEATDDVEVSGHRDLPRIETN
QIRGGALLALVEGVLLKAPKILRHVDKLGIEGWDWLKELKSKKEELVEEIEEENDEFNYEEEEDLSQYEDYEVEAVTKFI
GEVIAGRPVFSHPSKKGGFRLRYGRSRNTGFATDGFHPAIMYLVDDFMAVGTQLKTERPGKATCVVPVDSIEGPIVKLND
KSVLKIDTVEKAKQYRDDVEEILFLGDILVNYGDFLENNHTILPSSWCTEWYEKILKSENLEYTKEFIENPDQKEVVKYA
KLTNTPLHPKYTYFWHDISKDNINVLRNWIIGGRYNESNDSWGLTYDPEDPEISIVKRYLELIGCPHTVVDEKVEIFEYY
PLLYSLGYDFDEKQDVVEDIEEKLQNTKNNMHFINTIAPFEIRRNAYIYVGARMGRPEKAASRKMKPPVNGLFPIGNAGA
LVRLINKAVDEGKTDEIEISNVKCSCGNVSLYRTCPFCGSSVEPSGPSRIKLPIKEYWYKALENLKINKAGDVKCIKGMT
SKDKIIEPLEKAILRAKNDIFVFKDGTTRFDCTDVPVTHFRPVEIHGDIEKLKSLGYLKDIHGNPLENENQVLELNVQDV
IVPESCMDYFLNVSKFIDDLLEKYYKKDRFYNVNKREELVGHLIIGMAPHTSAGMVGRIIGYSKANVGYAHPYFHASKRR
NCDGDEDAFFLLLDAFMNFSKRFLPDKRGGQMDAPLVLTTILDPKEVDGEVHNMDSMWEYPLEFYEKSLEGIAPKEIKKI
METVEDRLDKESQYEGIGYTHETLKIDEGPLVCAYKTLGSMMEKTSAQLAVAKKIRATDERDVAEKVIQSHFVPDLIGNL
RAFSRQGVRCKCGAKYRRMPLKGICRKCGSRLILTVSKGAVEKYMDVSQTMAEKYNASDYIKQRLEIIRSGIDSLFVNDK
RKQVKIEDFFK

Sequences:
NA

Specific function: NA

COG id: COG1933

COG function: function code L; Archaeal DNA polymerase II, large subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA