| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is tsr
Identifier: 13358161
GI number: 13358161
Start: 744129
End: 745001
Strand: Reverse
Name: tsr
Synonym: UU596
Alternate gene names: 13358161
Gene position: 745001-744129 (Counterclockwise)
Preceding gene: 13358162
Following gene: 13358160
Centisome position: 99.11
GC content: 27.95
Gene sequence:
>873_bases ATGTCACCATTAGTTAATGCCAAAAAAATGATTCAAAATGCTTATGAAAATCATTATGCAGTGGCTGCAATTAATATCAA TAATTTAGAATGAATTAAAGCAGCATTATTAGCAGCTCAAGAAACAAACTCTCCTCTTTTATTAGCGACATCTGAAGGTG CCGTAAAATATATGGGTGGTTATGATAATTGTTATGCAATGGTTGTTAATTTAATAAAACAAATGAATATTAAAACTCCT GTTTGTTTGCATTTAGATCATGGTACATATGAAGGATGTATAAAAGCTATTAATGCTGGTTATTCCTCAATTATGTATGA TGGATCAAAACTTTCGATCGAAGAAAACATTAAAAACACTAAAGAACTTTTGACAATAACTAAATTAAAAGGTGTATCAG TAGAAGTTGAAGTTGGTTCAATTGGTGGGACAGAAGATGGGATTACTTCAGAAGGTGAATTAGCTAATATCGACGATTGT TATCAAATGTGTTTATTAGATATTGATATGTTAGCGTGTGGTATTGGAAATATTCACGGAATATATCCTAAAAATTGAAA AGGTTTAAATTTTAATTTATTAAAAGAAATTAACAATAAAGTGAATAAACCAATTGTTTTACACGGAGGTTCTGGTATTA GTGATGAACAAATTTTAAAAGCAATTAATTTGGGTGTAGCAAAAATTAATATTAATACAGAATGTCAAATTGCATTTTCA AATGCATTACAAGATCACTTAACAAAAGCAGGTGATTTAATTCTTTCTAAACAGTATGATCCACGAAAAATTTTGGCTTA TGGTGTGGACGCAATTAAAAATACAATCATTGATAAATTCACTAAGTTTAATAGTTTAAATAAAATAAAATAA
Upstream 100 bases:
>100_bases GTTGGCTACGAAGATGAAGATGAAGAATTTAAAAATAATAATACTTCTAATAAAGATGAAATAGAAGACGAAGAGGAATT AGAAGAGGAAGAATAAAAAA
Downstream 100 bases:
>100_bases GGAGAATAAAATGTCGTTATCAGCAGGTCTTGTTGGTTTGCCAAACGTTGGTAAATCCACATTATTTAATACAATTACAA ATTCTAGAGTTGAGGCAGCT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSPLVNAKKMIQNAYENHYAVAAININNLEWIKAALLAAQETNSPLLLATSEGAVKYMGGYDNCYAMVVNLIKQMNIKTP VCLHLDHGTYEGCIKAINAGYSSIMYDGSKLSIEENIKNTKELLTITKLKGVSVEVEVGSIGGTEDGITSEGELANIDDC YQMCLLDIDMLACGIGNIHGIYPKNWKGLNFNLLKEINNKVNKPIVLHGGSGISDEQILKAINLGVAKININTECQIAFS NALQDHLTKAGDLILSKQYDPRKILAYGVDAIKNTIIDKFTKFNSLNKIK
Sequences:
>Translated_290_residues MSPLVNAKKMIQNAYENHYAVAAININNLE*IKAALLAAQETNSPLLLATSEGAVKYMGGYDNCYAMVVNLIKQMNIKTP VCLHLDHGTYEGCIKAINAGYSSIMYDGSKLSIEENIKNTKELLTITKLKGVSVEVEVGSIGGTEDGITSEGELANIDDC YQMCLLDIDMLACGIGNIHGIYPKN*KGLNFNLLKEINNKVNKPIVLHGGSGISDEQILKAINLGVAKININTECQIAFS NALQDHLTKAGDLILSKQYDPRKILAYGVDAIKNTIIDKFTKFNSLNKIK >Mature_289_residues SPLVNAKKMIQNAYENHYAVAAININNLE*IKAALLAAQETNSPLLLATSEGAVKYMGGYDNCYAMVVNLIKQMNIKTPV CLHLDHGTYEGCIKAINAGYSSIMYDGSKLSIEENIKNTKELLTITKLKGVSVEVEVGSIGGTEDGITSEGELANIDDCY QMCLLDIDMLACGIGNIHGIYPKN*KGLNFNLLKEINNKVNKPIVLHGGSGISDEQILKAINLGVAKININTECQIAFSN ALQDHLTKAGDLILSKQYDPRKILAYGVDAIKNTIIDKFTKFNSLNKIK
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=290, Percent_Identity=34.4827586206897, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI87082041, Length=277, Percent_Identity=34.2960288808664, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1788072, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789293, Length=346, Percent_Identity=26.5895953757225, Blast_Score=91, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322790, Length=340, Percent_Identity=27.3529411764706, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 31305; Mature: 31173
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLVNAKKMIQNAYENHYAVAAININNLEIKAALLAAQETNSPLLLATSEGAVKYMGGY CCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEECCCCCCEEEEECCCCEEECCCC DNCYAMVVNLIKQMNIKTPVCLHLDHGTYEGCIKAINAGYSSIMYDGSKLSIEENIKNTK HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHEEECCCEEEHHHHHHHHH ELLTITKLKGVSVEVEVGSIGGTEDGITSEGELANIDDCYQMCLLDIDMLACGIGNIHGI HHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE YPKNKGLNFNLLKEINNKVNKPIVLHGGSGISDEQILKAINLGVAKININTECQIAFSNA CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCEEEEEHHHH LQDHLTKAGDLILSKQYDPRKILAYGVDAIKNTIIDKFTKFNSLNKIK HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SPLVNAKKMIQNAYENHYAVAAININNLEIKAALLAAQETNSPLLLATSEGAVKYMGGY CCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEECCCCCCEEEEECCCCEEECCCC DNCYAMVVNLIKQMNIKTPVCLHLDHGTYEGCIKAINAGYSSIMYDGSKLSIEENIKNTK HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHEEECCCEEEHHHHHHHHH ELLTITKLKGVSVEVEVGSIGGTEDGITSEGELANIDDCYQMCLLDIDMLACGIGNIHGI HHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE YPKNKGLNFNLLKEINNKVNKPIVLHGGSGISDEQILKAINLGVAKININTECQIAFSNA CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCEEEEEHHHH LQDHLTKAGDLILSKQYDPRKILAYGVDAIKNTIIDKFTKFNSLNKIK HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]