| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358156
GI number: 13358156
Start: 740263
End: 740982
Strand: Reverse
Name: Not Available
Synonym: UU591
Alternate gene names: NA
Gene position: 740982-740263 (Counterclockwise)
Preceding gene: 13358157
Following gene: 13358155
Centisome position: 98.57
GC content: 23.19
Gene sequence:
>720_bases GTGATACCATTGAATTATTTAACACACTATTTCAGTTTGAAGTATAAAGGGGATTGATCAAAAATTTATTTAGCATTAAT AAATCATGAAGATCAAAATGAATATTTATTTTTAGAAAAAGAAGATTACGAAAAAGTTAAAGCTATTGATTTAACTGATG AAAAATATCCTAATAAATATAAAAAAATTAACCAACCTCCTTTTATTTTATATTATTCAACAACAGTTGAATGACTTGAT AAAAAAAATATTTGGTTAATAGATTATGAAAATGCAATATCAAATTATGATATACTAACCTTGATAAAAGCAGGATATGG ATTTGTTATTTATTATGATAGTGTTGTTTTGGACACACTTATCAATCGTTTAATTTCTCTTAAAGCTAGAATATGTATCA TCACAGATGAGGGAATCTATAGTTCTAAAAACATTAAATACTTAAGTTACTGCAATGTTAGTGTAATATCTGAAATTCCA AAAGATTACAATAGTAATAAAATTACACAGGATTTAAAACGTCTTGCATGCGCTTCAAGCGACCATATTTTATGTGTTAA TGAGTTATATCAAATAGATGATTATCTTTTTAATAAATATAAAGATTGCCAATTAGATTTGGTGTTATTAGATAAAAAAT TAGCTAAGCAAAACACAATTTATCCCAAATACATTAATCGTATTTATCAATTTATTAAAAATTCAAAATTAATAAATTAA
Upstream 100 bases:
>100_bases ATGAGAATTTATTTAATGATTTTTCTAATGGATTGATTTGTAAAGTTAATTATGATTAGTAATTTTAAAAATAAATCATT ATTGCTAATAATTTAATGAG
Downstream 100 bases:
>100_bases ACAACAACTATAAAATATTATAATTATTTACAATTGTTAAAACGAGCAAATAATTGTAGTAAATGGGAGAAAAAATGCAA AAAGATTTAATAGTAGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MIPLNYLTHYFSLKYKGDWSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVEWLD KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN
Sequences:
>Translated_239_residues MIPLNYLTHYFSLKYKGD*SKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVE*LD KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN >Mature_239_residues MIPLNYLTHYFSLKYKGD*SKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVE*LD KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN
Specific function: Unknown
COG id: COG0758
COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27998; Mature: 27998
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLNYLTHYFSLKYKGDSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYK CCCHHHHHEEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHH KINQPPFILYYSTTVELDKKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLIN HCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHEEEECCCCEEEEEEHHHHHHHHHH RLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIPKDYNSNKITQDLKRLACASSDH HHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC ILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN EEEHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIPLNYLTHYFSLKYKGDSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYK CCCHHHHHEEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHH KINQPPFILYYSTTVELDKKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLIN HCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHEEEECCCCEEEEEEHHHHHHHHHH RLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIPKDYNSNKITQDLKRLACASSDH HHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC ILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN EEEHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA