Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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The map label for this gene is Not Available

Identifier: 13358156

GI number: 13358156

Start: 740263

End: 740982

Strand: Reverse

Name: Not Available

Synonym: UU591

Alternate gene names: NA

Gene position: 740982-740263 (Counterclockwise)

Preceding gene: 13358157

Following gene: 13358155

Centisome position: 98.57

GC content: 23.19

Gene sequence:

>720_bases
GTGATACCATTGAATTATTTAACACACTATTTCAGTTTGAAGTATAAAGGGGATTGATCAAAAATTTATTTAGCATTAAT
AAATCATGAAGATCAAAATGAATATTTATTTTTAGAAAAAGAAGATTACGAAAAAGTTAAAGCTATTGATTTAACTGATG
AAAAATATCCTAATAAATATAAAAAAATTAACCAACCTCCTTTTATTTTATATTATTCAACAACAGTTGAATGACTTGAT
AAAAAAAATATTTGGTTAATAGATTATGAAAATGCAATATCAAATTATGATATACTAACCTTGATAAAAGCAGGATATGG
ATTTGTTATTTATTATGATAGTGTTGTTTTGGACACACTTATCAATCGTTTAATTTCTCTTAAAGCTAGAATATGTATCA
TCACAGATGAGGGAATCTATAGTTCTAAAAACATTAAATACTTAAGTTACTGCAATGTTAGTGTAATATCTGAAATTCCA
AAAGATTACAATAGTAATAAAATTACACAGGATTTAAAACGTCTTGCATGCGCTTCAAGCGACCATATTTTATGTGTTAA
TGAGTTATATCAAATAGATGATTATCTTTTTAATAAATATAAAGATTGCCAATTAGATTTGGTGTTATTAGATAAAAAAT
TAGCTAAGCAAAACACAATTTATCCCAAATACATTAATCGTATTTATCAATTTATTAAAAATTCAAAATTAATAAATTAA

Upstream 100 bases:

>100_bases
ATGAGAATTTATTTAATGATTTTTCTAATGGATTGATTTGTAAAGTTAATTATGATTAGTAATTTTAAAAATAAATCATT
ATTGCTAATAATTTAATGAG

Downstream 100 bases:

>100_bases
ACAACAACTATAAAATATTATAATTATTTACAATTGTTAAAACGAGCAAATAATTGTAGTAAATGGGAGAAAAAATGCAA
AAAGATTTAATAGTAGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIPLNYLTHYFSLKYKGDWSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVEWLD
KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP
KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN

Sequences:

>Translated_239_residues
MIPLNYLTHYFSLKYKGD*SKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVE*LD
KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP
KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN
>Mature_239_residues
MIPLNYLTHYFSLKYKGD*SKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYKKINQPPFILYYSTTVE*LD
KKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLINRLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIP
KDYNSNKITQDLKRLACASSDHILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27998; Mature: 27998

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLNYLTHYFSLKYKGDSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYK
CCCHHHHHEEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHH
KINQPPFILYYSTTVELDKKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLIN
HCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHEEEECCCCEEEEEEHHHHHHHHHH
RLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIPKDYNSNKITQDLKRLACASSDH
HHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
ILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN
EEEHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIPLNYLTHYFSLKYKGDSKIYLALINHEDQNEYLFLEKEDYEKVKAIDLTDEKYPNKYK
CCCHHHHHEEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHH
KINQPPFILYYSTTVELDKKNIWLIDYENAISNYDILTLIKAGYGFVIYYDSVVLDTLIN
HCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHEEEECCCCEEEEEEHHHHHHHHHH
RLISLKARICIITDEGIYSSKNIKYLSYCNVSVISEIPKDYNSNKITQDLKRLACASSDH
HHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
ILCVNELYQIDDYLFNKYKDCQLDLVLLDKKLAKQNTIYPKYINRIYQFIKNSKLIN
EEEHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA