| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is kch
Identifier: 13358138
GI number: 13358138
Start: 717992
End: 719278
Strand: Direct
Name: kch
Synonym: UU573
Alternate gene names: NA
Gene position: 717992-719278 (Clockwise)
Preceding gene: 13358137
Following gene: 13358143
Centisome position: 95.51
GC content: 25.95
Gene sequence:
>1287_bases ATGACAAATGATGAGCGTAAAGAATTTATTAGAAAAAATAAAATTATTTATTTTAATCGAATTCGTTACTTTTTTTATGA ATGAACAGATATGAAAGCATATCAACGCATGTTAGTGCCTGAAACTTTTTTCTCATTTTTTTATCAATTATTCGTCTTAA TGATTGCTTTTTGTTCCGTTACAATTATTATTTATAATCAAATTGAATTAAAACAAGCTAATGAAGAGCACATAGACTTT ATTGCTAAATATTTTGAAGTTTATTATGCTTTTAATATTTTTTTTATTATTGATTATTTAATTCGTATTTCATACGCTGA TTACACATACAATTCAATTTCAAGACTAAAGGCTTTTTTAATAGCACCATTTCGTTTTGTTAATTTATTGGATCTAGTAT CTTTTGTAGCAATTGTTATCATTTATAATACAGGATTATTAGATTTTGTAGCAAAAATGAATGAAACAACTTCATATTCA CAAAAATTTGATTATTATTATCAAATCATCAATAATAATGCTTATATGAATGTTGTTCCTTGTATGTTTTTAATTAAAAT CTTAGGTGCGCATTCTAAAATTATCAAAAATGTTATTTTGAGTAGTGAAGTTAATTTCTTTTGACAAATTTTTAAACGGC GTTGACGTGTATTATTATCATCATTCTTAATTTTAGTTTTATTTACTTTTCTATTAAGTTTTATTATTTATAGAATTGAA CAAAATTATTATGAAATAAAGCATATTTTGCCTGGTAATCCGTTGTACAAACTTAAAAATTTTGGTGAAACTTTGTGGTT TTCTATGGGAACAATTACCACGATAGCTTATGGTGATGTTACACCTGTTTCTCCAGCTGGTAAAGTATTTGCCGTTATTT TAGGTGTAATTGGTGTTACCTATTATGGTTTTCTGACTTCATTATTTGCTTCAGCTTTAATTTCAGTAATTAATGAATTT GGTAAACGCCGTGATAGCCGTAGATTGTTAGAATTTCAAAATGAAAACGAGCGATTATTGCATGAATTTTCTGAGCAAAT TAAAGTAGATATTGTCCAAGAATTAATTAAAAATAATGTTATTCAGGATCCAGAAGAAATTAAACGAATTGAAGATCTTC AAAATCAAGAACGTGAAGCTTTAAAAATGAAAGCGAAACGCCGAAAGAAAATTTATTTTAGTGATGATTTATTTGATGAT ACAAAACGAATTAGTGTTTCAAACGTCAAAGTACGTAGTGCTTCAAATGTAACAAAAGTATTAGGTCGATCATCAACAAA AAAATAA
Upstream 100 bases:
>100_bases AATGAATACGAGTTGGTTAATGAGTCAATTATTTAATACTTAATATATAAGTTTTTAAATTTAATTATTTTATTTAAAAT AATAGGAGTAAAATAAAACG
Downstream 100 bases:
>100_bases TTAAAAACCTGCAAGGTTAAATTGCTGGTTTTTAATTTTATTTTCAATATTTACCTCACTCAATGTCTTTTTGTTTTCAC TGAGGATCATCTCAAAAAGT
Product: potassium channel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTNDERKEFIRKNKIIYFNRIRYFFYEWTDMKAYQRMLVPETFFSFFYQLFVLMIAFCSVTIIIYNQIELKQANEEHIDF IAKYFEVYYAFNIFFIIDYLIRISYADYTYNSISRLKAFLIAPFRFVNLLDLVSFVAIVIIYNTGLLDFVAKMNETTSYS QKFDYYYQIINNNAYMNVVPCMFLIKILGAHSKIIKNVILSSEVNFFWQIFKRRWRVLLSSFLILVLFTFLLSFIIYRIE QNYYEIKHILPGNPLYKLKNFGETLWFSMGTITTIAYGDVTPVSPAGKVFAVILGVIGVTYYGFLTSLFASALISVINEF GKRRDSRRLLEFQNENERLLHEFSEQIKVDIVQELIKNNVIQDPEEIKRIEDLQNQEREALKMKAKRRKKIYFSDDLFDD TKRISVSNVKVRSASNVTKVLGRSSTKK
Sequences:
>Translated_428_residues MTNDERKEFIRKNKIIYFNRIRYFFYE*TDMKAYQRMLVPETFFSFFYQLFVLMIAFCSVTIIIYNQIELKQANEEHIDF IAKYFEVYYAFNIFFIIDYLIRISYADYTYNSISRLKAFLIAPFRFVNLLDLVSFVAIVIIYNTGLLDFVAKMNETTSYS QKFDYYYQIINNNAYMNVVPCMFLIKILGAHSKIIKNVILSSEVNFF*QIFKRR*RVLLSSFLILVLFTFLLSFIIYRIE QNYYEIKHILPGNPLYKLKNFGETLWFSMGTITTIAYGDVTPVSPAGKVFAVILGVIGVTYYGFLTSLFASALISVINEF GKRRDSRRLLEFQNENERLLHEFSEQIKVDIVQELIKNNVIQDPEEIKRIEDLQNQEREALKMKAKRRKKIYFSDDLFDD TKRISVSNVKVRSASNVTKVLGRSSTKK >Mature_427_residues TNDERKEFIRKNKIIYFNRIRYFFYE*TDMKAYQRMLVPETFFSFFYQLFVLMIAFCSVTIIIYNQIELKQANEEHIDFI AKYFEVYYAFNIFFIIDYLIRISYADYTYNSISRLKAFLIAPFRFVNLLDLVSFVAIVIIYNTGLLDFVAKMNETTSYSQ KFDYYYQIINNNAYMNVVPCMFLIKILGAHSKIIKNVILSSEVNFF*QIFKRR*RVLLSSFLILVLFTFLLSFIIYRIEQ NYYEIKHILPGNPLYKLKNFGETLWFSMGTITTIAYGDVTPVSPAGKVFAVILGVIGVTYYGFLTSLFASALISVINEFG KRRDSRRLLEFQNENERLLHEFSEQIKVDIVQELIKNNVIQDPEEIKRIEDLQNQEREALKMKAKRRKKIYFSDDLFDDT KRISVSNVKVRSASNVTKVLGRSSTKK
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50187; Mature: 50056
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDERKEFIRKNKIIYFNRIRYFFYETDMKAYQRMLVPETFFSFFYQLFVLMIAFCSVT CCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIYNQIELKQANEEHIDFIAKYFEVYYAFNIFFIIDYLIRISYADYTYNSISRLKAFLI HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH APFRFVNLLDLVSFVAIVIIYNTGLLDFVAKMNETTSYSQKFDYYYQIINNNAYMNVVPC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH MFLIKILGAHSKIIKNVILSSEVNFFQIFKRRRVLLSSFLILVLFTFLLSFIIYRIEQNY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEIKHILPGNPLYKLKNFGETLWFSMGTITTIAYGDVTPVSPAGKVFAVILGVIGVTYYG HHHHHCCCCCCHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH FLTSLFASALISVINEFGKRRDSRRLLEFQNENERLLHEFSEQIKVDIVQELIKNNVIQD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PEEIKRIEDLQNQEREALKMKAKRRKKIYFSDDLFDDTKRISVSNVKVRSASNVTKVLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHCEEECCEEEECHHHHHHHHCC SSTKK CCCCC >Mature Secondary Structure TNDERKEFIRKNKIIYFNRIRYFFYETDMKAYQRMLVPETFFSFFYQLFVLMIAFCSVT CCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIYNQIELKQANEEHIDFIAKYFEVYYAFNIFFIIDYLIRISYADYTYNSISRLKAFLI HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH APFRFVNLLDLVSFVAIVIIYNTGLLDFVAKMNETTSYSQKFDYYYQIINNNAYMNVVPC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH MFLIKILGAHSKIIKNVILSSEVNFFQIFKRRRVLLSSFLILVLFTFLLSFIIYRIEQNY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEIKHILPGNPLYKLKNFGETLWFSMGTITTIAYGDVTPVSPAGKVFAVILGVIGVTYYG HHHHHCCCCCCHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH FLTSLFASALISVINEFGKRRDSRRLLEFQNENERLLHEFSEQIKVDIVQELIKNNVIQD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PEEIKRIEDLQNQEREALKMKAKRRKKIYFSDDLFDDTKRISVSNVKVRSASNVTKVLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHCEEECCEEEECHHHHHHHHCC SSTKK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA