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The map label for this gene is oppC

Identifier: 13358125

GI number: 13358125

Start: 701658

End: 702656

Strand: Reverse

Name: oppC

Synonym: UU561

Alternate gene names: 13358125

Gene position: 702656-701658 (Counterclockwise)

Preceding gene: 13358126

Following gene: 13358124

Centisome position: 93.47

GC content: 30.03

Gene sequence:

>999_bases
ATGGCGAAGTTTGGAGAATATTTAAAACAAAAATCAAAAAGTATTACTTCATCATTTATAGATGAATTAACATCTGATGC
ACCAAATAAGTTTTTACAACCTTTTCAACACCAACAATGAAAGATTATCGGTCATTTAATTGAGTTTAGAGATAATGCAT
ACATGGGAGGGCGCCCTCGTCCTTTTCGTGAATTTGCTAACCGATACGGACGTTCTTTTTCTGGATTAATCGGATTAGCA
ATTATTATTATTTTATTTATTTTGGCAATTATTATTCCTTTTACAACAGGATCACCAACAGAATTACGACCAAATAAACG
ATATTTAGATTATTTTACAGATGGTTTTATTTTTGGAACTGACAATAATGGGCGTGATTTATGAGCCATGCTATGGTGAG
GATTACGTTATTCATTAGGAATTGCTATTATTGTAACTGCTATTGAATTAGTAGTTGGAGTAACTTTAGGGATTTTAATG
GGTTATTTTGAAATGTTTGATAAAATCATGACATTCATTATTAAAATTTTAACAAACGTTCCAACAATCATCATTTTAAT
GATTTTAACAATTATTTTAAAACCATCATTTGGAGTTATGATTTTTGCTATTTCATTTTCTGGTTGAATTGCAATGGCTA
ATCAAATGCGTTCACAAGTTAAACGTGCTCGTAGTTTTTTATGGGTTGCAGCTTCAAAAACATTAGGAACAAAAGCATGA
AAAATTATTTTAAATTTCTTACCAATTTTAATTCCAATGATGATTACTCAATTAGTATTTAGTATTCCAGGAGCTATTTT
AGCTGAATCATCACTTGCTTTTATTGGTTTATCTTTACCAAATACACCAACTTTAGGTAATTTAATTGCAGATGGTTCAT
CAATCATTACTTTATATCCACGTTTTACTTTAATTCCATCATTTTTACTAGTTTGCTTAGTTGCTTCAATTCAATTAGTT
GGGGGTGCCACACAAGACGCATTAAGACGTCAAAGATAA

Upstream 100 bases:

>100_bases
GTAATTATTTATTCATTAATTACAATTATTGGTTATACAATTCGAGATGCTTTATATCAAATTATTGATCCACGTATAAG
AAGAGGAGGAAAATAAATTT

Downstream 100 bases:

>100_bases
TTTATGAAACAAAAAAACAACCGATATACTTATATTAACTATCTTCGTAGTCAACGCGCTTTTATTCAAACATTAAAACC
ACAAATTTTAAAATTAACTT

Product: oligopeptide transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAKFGEYLKQKSKSITSSFIDELTSDAPNKFLQPFQHQQWKIIGHLIEFRDNAYMGGRPRPFREFANRYGRSFSGLIGLA
IIIILFILAIIIPFTTGSPTELRPNKRYLDYFTDGFIFGTDNNGRDLWAMLWWGLRYSLGIAIIVTAIELVVGVTLGILM
GYFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSGWIAMANQMRSQVKRARSFLWVAASKTLGTKAW
KIILNFLPILIPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLV
GGATQDALRRQR

Sequences:

>Translated_332_residues
MAKFGEYLKQKSKSITSSFIDELTSDAPNKFLQPFQHQQ*KIIGHLIEFRDNAYMGGRPRPFREFANRYGRSFSGLIGLA
IIIILFILAIIIPFTTGSPTELRPNKRYLDYFTDGFIFGTDNNGRDL*AMLW*GLRYSLGIAIIVTAIELVVGVTLGILM
GYFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSG*IAMANQMRSQVKRARSFLWVAASKTLGTKA*
KIILNFLPILIPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLV
GGATQDALRRQR
>Mature_331_residues
AKFGEYLKQKSKSITSSFIDELTSDAPNKFLQPFQHQQ*KIIGHLIEFRDNAYMGGRPRPFREFANRYGRSFSGLIGLAI
IIILFILAIIIPFTTGSPTELRPNKRYLDYFTDGFIFGTDNNGRDL*AMLW*GLRYSLGIAIIVTAIELVVGVTLGILMG
YFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSG*IAMANQMRSQVKRARSFLWVAASKTLGTKA*K
IILNFLPILIPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLVG
GATQDALRRQR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=301, Percent_Identity=23.9202657807309, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788505, Length=243, Percent_Identity=27.5720164609054, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=28.3464566929134, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36198; Mature: 36067

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFGEYLKQKSKSITSSFIDELTSDAPNKFLQPFQHQQKIIGHLIEFRDNAYMGGRPRP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
FREFANRYGRSFSGLIGLAIIIILFILAIIIPFTTGSPTELRPNKRYLDYFTDGFIFGTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEECC
NNGRDLAMLWGLRYSLGIAIIVTAIELVVGVTLGILMGYFEMFDKIMTFIIKILTNVPTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IILMILTIILKPSFGVMIFAISFSGIAMANQMRSQVKRARSFLWVAASKTLGTKAKIILN
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FLPILIPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLI
HHHHHHHHHHHHHHHHCCHHHHHCCCHHEEEECCCCCCCHHHHHCCCCCEEEECHHHHHH
PSFLLVCLVASIQLVGGATQDALRRQR
HHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure 
AKFGEYLKQKSKSITSSFIDELTSDAPNKFLQPFQHQQKIIGHLIEFRDNAYMGGRPRP
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
FREFANRYGRSFSGLIGLAIIIILFILAIIIPFTTGSPTELRPNKRYLDYFTDGFIFGTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEECC
NNGRDLAMLWGLRYSLGIAIIVTAIELVVGVTLGILMGYFEMFDKIMTFIIKILTNVPTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IILMILTIILKPSFGVMIFAISFSGIAMANQMRSQVKRARSFLWVAASKTLGTKAKIILN
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FLPILIPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLI
HHHHHHHHHHHHHHHHCCHHHHHCCCHHEEEECCCCCCCHHHHHCCCCCEEEECHHHHHH
PSFLLVCLVASIQLVGGATQDALRRQR
HHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2352474; 11463916 [H]