| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358113
GI number: 13358113
Start: 682658
End: 684424
Strand: Reverse
Name: Not Available
Synonym: UU549
Alternate gene names: NA
Gene position: 684424-682658 (Counterclockwise)
Preceding gene: 13358114
Following gene: 13358112
Centisome position: 91.05
GC content: 26.26
Gene sequence:
>1767_bases ATGAAAAAAAACAAAAGTAAAAAGCTAATTTTTTCAATATTAGGAATTAGTTTTATTGGATTAACGCCAATTGTTGCTGC ATCGTGTTCAGCAGCTGCTCATCCTCAAGTTAATGTTCATTATGTTAGTGCTAATGCTACAACTAATAATATTGGTAAAA TTAAAATTCGAGCCTTTGAAGGTAAGAATCAAAAACATGAAATGATTTTTGAGAATCAAAATTTATTAGATGATGTTTAT TATGCGGCAGGTGATTTAACTTATACGAGTGTTAAAGATAATAAACGCTTTGATAAAAACAATAAAGAAATCGATCAATT TGGTTATTTGGTTCCCAAAAAAGAAGTTTGAACAAAAAGTTTATCAAGTTCAACTAAACTAACACCAATTGATTTGAGTA TTTTGCAAAATGAATTGATTCGTTTAATTGGTAATAAGTTAAATTTTGATTCAACAAGTAAATATGCTAATAATTTAGAA ATTCTTGACCAAACAAAAAAACAAACTGTTTTTAACCAAAAACTATATTCAAGTGATGAATTAACAAAAATAAATAAGGT TAGTGAATTAATCAACTCTTTAGTTATTAGTGATGGATTGTATACTTATATTACCTCTATGACAGATCAATTAATAAAAT GATTAGCAGAACATGCATTTAATAACCATTCAAATAAAGATTTTGAACTTTTTAAAGGGTTAAAAAACGAAGTTGCTAAA GAATTTTTATTAGCTTTAGTACAAGGTGTAGGTGCAGGTAAACATACATACAAACTTGCTTTATATAATTTTAGTTTTGA TTGAGAATATGTAGATGCAATTACAGGTTTAAGTATTAATAAACCTAATTTTGGTGTTAAAGTAAATGATGAATTATTAG TTAATCCAAGTTTAAAAAATGTTCTTGTACGTTTAAAAAATATTAAATTACAATATGCTTGATATAACTCTTCAAACAAA AAAGCTGGATCATTTATGGAAGCTAGTTCTAATGGTAGTCAACTAAATGCACTTAGTTCAATTAACGCTGCTTTATCAAG TGTTGATAAAAAAACTTATGCTGAAATTCATGATGATCACAAACCAGAAATTCGTAATTTAGTTTATGAAATTCCATTAA AAGATATGGTAGTTAATTTTGCACCATCAACAATGCGTTCTGCTAATATTAATCAAAAAGCAACACAAACTCTTCAAGAA AATTTTTTAAAAATTAAAAATCAAAAAACAGGGTTAACTGAGACAGAGAAAAAACGTACAACTGTTTATAATGAATACTA CACAGGTACATTATCTAAAATTCATGCGTTTAGTATTTTGGGCCGCGATTTAAAACAAGAATTAAAAAACGAAGCTAAAG TTAATAAAAAAGAGTATGTTGAAGATAAAAAACTTGAAGACTGACAATATTATGAACATGATCGTGGTCTAAATGGTGTT TATCCATATGCTTTCTTAGGTGAAAAAAAGATCAATGAATTAAAAATAGATGATTTCATCAAATCACGCAAATTTGTTGA AGCAATTAAAGCATCTAACAATTCTCGTACTATTTTACCTGTTACTAACCCTGAAAACAACCAAATTTTATCAAAACAAT CATATTCGCAATTAGCAATGATTGCTTTAGAAAATAAGGATGCTAATATTCATAATTTGACTAGTTTTAAAGCTGCTAAG AATAATTTTAGAAAATATCTTTTTAACCTTAATGAAATTAAAAGTGTAAATGTTAACTATAGCAAATGAAATGAAAAGAA TTCATAA
Upstream 100 bases:
>100_bases TTGTTGAAAAGAACCGAAACGGGTCAACAGGTGAAACTGATATTATTTTTTCTAAATTAAATAGTAAATTTATTCGTGCA ACCACTTCAAAGGAGTAAAT
Downstream 100 bases:
>100_bases TTAATGAAACTAAACAAAGTTATTTAAAAAATATTATTAAAAAAATCAACAACATCGAGAATCATCAAGTAGTTTTTCCT TTAAAAAAACAACGGTTTAG
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MKKNKSKKLIFSILGISFIGLTPIVAASCSAAAHPQVNVHYVSANATTNNIGKIKIRAFEGKNQKHEMIFENQNLLDDVY YAAGDLTYTSVKDNKRFDKNNKEIDQFGYLVPKKEVWTKSLSSSTKLTPIDLSILQNELIRLIGNKLNFDSTSKYANNLE ILDQTKKQTVFNQKLYSSDELTKINKVSELINSLVISDGLYTYITSMTDQLIKWLAEHAFNNHSNKDFELFKGLKNEVAK EFLLALVQGVGAGKHTYKLALYNFSFDWEYVDAITGLSINKPNFGVKVNDELLVNPSLKNVLVRLKNIKLQYAWYNSSNK KAGSFMEASSNGSQLNALSSINAALSSVDKKTYAEIHDDHKPEIRNLVYEIPLKDMVVNFAPSTMRSANINQKATQTLQE NFLKIKNQKTGLTETEKKRTTVYNEYYTGTLSKIHAFSILGRDLKQELKNEAKVNKKEYVEDKKLEDWQYYEHDRGLNGV YPYAFLGEKKINELKIDDFIKSRKFVEAIKASNNSRTILPVTNPENNQILSKQSYSQLAMIALENKDANIHNLTSFKAAK NNFRKYLFNLNEIKSVNVNYSKWNEKNS
Sequences:
>Translated_588_residues MKKNKSKKLIFSILGISFIGLTPIVAASCSAAAHPQVNVHYVSANATTNNIGKIKIRAFEGKNQKHEMIFENQNLLDDVY YAAGDLTYTSVKDNKRFDKNNKEIDQFGYLVPKKEV*TKSLSSSTKLTPIDLSILQNELIRLIGNKLNFDSTSKYANNLE ILDQTKKQTVFNQKLYSSDELTKINKVSELINSLVISDGLYTYITSMTDQLIK*LAEHAFNNHSNKDFELFKGLKNEVAK EFLLALVQGVGAGKHTYKLALYNFSFD*EYVDAITGLSINKPNFGVKVNDELLVNPSLKNVLVRLKNIKLQYA*YNSSNK KAGSFMEASSNGSQLNALSSINAALSSVDKKTYAEIHDDHKPEIRNLVYEIPLKDMVVNFAPSTMRSANINQKATQTLQE NFLKIKNQKTGLTETEKKRTTVYNEYYTGTLSKIHAFSILGRDLKQELKNEAKVNKKEYVEDKKLED*QYYEHDRGLNGV YPYAFLGEKKINELKIDDFIKSRKFVEAIKASNNSRTILPVTNPENNQILSKQSYSQLAMIALENKDANIHNLTSFKAAK NNFRKYLFNLNEIKSVNVNYSK*NEKNS >Mature_588_residues MKKNKSKKLIFSILGISFIGLTPIVAASCSAAAHPQVNVHYVSANATTNNIGKIKIRAFEGKNQKHEMIFENQNLLDDVY YAAGDLTYTSVKDNKRFDKNNKEIDQFGYLVPKKEV*TKSLSSSTKLTPIDLSILQNELIRLIGNKLNFDSTSKYANNLE ILDQTKKQTVFNQKLYSSDELTKINKVSELINSLVISDGLYTYITSMTDQLIK*LAEHAFNNHSNKDFELFKGLKNEVAK EFLLALVQGVGAGKHTYKLALYNFSFD*EYVDAITGLSINKPNFGVKVNDELLVNPSLKNVLVRLKNIKLQYA*YNSSNK KAGSFMEASSNGSQLNALSSINAALSSVDKKTYAEIHDDHKPEIRNLVYEIPLKDMVVNFAPSTMRSANINQKATQTLQE NFLKIKNQKTGLTETEKKRTTVYNEYYTGTLSKIHAFSILGRDLKQELKNEAKVNKKEYVEDKKLED*QYYEHDRGLNGV YPYAFLGEKKINELKIDDFIKSRKFVEAIKASNNSRTILPVTNPENNQILSKQSYSQLAMIALENKDANIHNLTSFKAAK NNFRKYLFNLNEIKSVNVNYSK*NEKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65817; Mature: 65817
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKSKKLIFSILGISFIGLTPIVAASCSAAAHPQVNVHYVSANATTNNIGKIKIRAFE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC GKNQKHEMIFENQNLLDDVYYAAGDLTYTSVKDNKRFDKNNKEIDQFGYLVPKKEVTKSL CCCCCCHHEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHH SSSTKLTPIDLSILQNELIRLIGNKLNFDSTSKYANNLEILDQTKKQTVFNQKLYSSDEL HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH TKINKVSELINSLVISDGLYTYITSMTDQLIKLAEHAFNNHSNKDFELFKGLKNEVAKEF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLALVQGVGAGKHTYKLALYNFSFDEYVDAITGLSINKPNFGVKVNDELLVNPSLKNVLV HHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCEEECCCHHHHHH RLKNIKLQYAYNSSNKKAGSFMEASSNGSQLNALSSINAALSSVDKKTYAEIHDDHKPEI HHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RNLVYEIPLKDMVVNFAPSTMRSANINQKATQTLQENFLKIKNQKTGLTETEKKRTTVYN HHHHHHCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH EYYTGTLSKIHAFSILGRDLKQELKNEAKVNKKEYVEDKKLEDQYYEHDRGLNGVYPYAF HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LGEKKINELKIDDFIKSRKFVEAIKASNNSRTILPVTNPENNQILSKQSYSQLAMIALEN CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECHHHHHHEEEEEEEC KDANIHNLTSFKAAKNNFRKYLFNLNEIKSVNVNYSKNEKNS CCCCCHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCC >Mature Secondary Structure MKKNKSKKLIFSILGISFIGLTPIVAASCSAAAHPQVNVHYVSANATTNNIGKIKIRAFE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC GKNQKHEMIFENQNLLDDVYYAAGDLTYTSVKDNKRFDKNNKEIDQFGYLVPKKEVTKSL CCCCCCHHEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHH SSSTKLTPIDLSILQNELIRLIGNKLNFDSTSKYANNLEILDQTKKQTVFNQKLYSSDEL HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH TKINKVSELINSLVISDGLYTYITSMTDQLIKLAEHAFNNHSNKDFELFKGLKNEVAKEF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLALVQGVGAGKHTYKLALYNFSFDEYVDAITGLSINKPNFGVKVNDELLVNPSLKNVLV HHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCEEECCCHHHHHH RLKNIKLQYAYNSSNKKAGSFMEASSNGSQLNALSSINAALSSVDKKTYAEIHDDHKPEI HHHHEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RNLVYEIPLKDMVVNFAPSTMRSANINQKATQTLQENFLKIKNQKTGLTETEKKRTTVYN HHHHHHCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH EYYTGTLSKIHAFSILGRDLKQELKNEAKVNKKEYVEDKKLEDQYYEHDRGLNGVYPYAF HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LGEKKINELKIDDFIKSRKFVEAIKASNNSRTILPVTNPENNQILSKQSYSQLAMIALEN CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECHHHHHHEEEEEEEC KDANIHNLTSFKAAKNNFRKYLFNLNEIKSVNVNYSKNEKNS CCCCCHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA