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The map label for this gene is dcm

Identifier: 13358092

GI number: 13358092

Start: 656402

End: 657301

Strand: Reverse

Name: dcm

Synonym: UU528

Alternate gene names: 13358092

Gene position: 657301-656402 (Counterclockwise)

Preceding gene: 13358094

Following gene: 13358091

Centisome position: 87.44

GC content: 27.78

Gene sequence:

>900_bases
GTGACTGGTGAGCAGTTAATAAAAAGTGTTGGGAACAAAGGGATAGATTTACTTACTTATTCATTCCCTTGTCAAGACTT
ATCAACAGCTGGAAGCTTTAGTAAAAAAGCTTTTGGAATGAAAAAAGGATCCGGTACACGTTCTGGATTACTATGAGAAA
TTGAACGCATTTTATTCGATTTGCAAAAATTAAATCAATTACCACAATTTCTTTTATTAGAAAACGTTAATAACATGTTA
TCTAAACAACATAAGCTAGATTATGATATGTGAACCAAATCTTTAAAACAATTAGGTTATAGTACATGTACTTTTCAATT
AAACGCTCTTGATTATGGGTCAGCACAACGTCGTAAACGAGTATATGCAATTTCGATTCTAAACTATGATGGATTAATTG
ATAGTAATGGAAATATTTTAGATTTAGAAGCACCTATTTTTGATGGAAAACAAAAACAATTAAAGGATGTTTTAAAAACT
AATTATAAAATTGAAAAATATTATCAAGAAGCATATTTAGCTCAACCAAATCGCACATTTTCAAGAATAAAATATGTCAT
TCCAAAATATGATTTATTAAATCCTAATTGTTATTGTACTTCAACAATTACAACACGTCAAGATCGTTTTCCTAATGGTG
GTTATATCAATTTAAAAAATACGATTTTAGGTGATGATTATCGTGAAAAAGATCACAATAATTTACCTAAAAAAGCAAAC
TTTCGTTTATTAACAAATCGTGAAGCCTATCTATTAATGGGCTTTAATGAAAAAGATTTTGAAGCGATTCAAGCTAAGGG
AATATCAAAAGCTAAAATGTATCAACAAGCTGGAAATTCAATTGTTGTTGATGTAATGGTTTATTTAATGAAATTAATTC
AAGAAAGATTTAATAAATAA

Upstream 100 bases:

>100_bases
AGACCCAATTCGTAAAAAAATTAGTTCTTTTAGCGAAAATATTAAACGTGAATTATATGATGCATATCTTAATTCTAATA
ATTTAGGAAGTATTTTAAGT

Downstream 100 bases:

>100_bases
TTTATGGCTAAATTAAAGTTTTGAAAAATAAGTACAAGTATTAATACATTTATTAAATATTTGATCTGCAATGAAAATAA
TGTTAAAAAGATTTTTTCGA

Product: cytosine-specific methyltransferase

Products: NA

Alternate protein names: Cytosine-specific methyltransferase SssI; M.SssI [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTGEQLIKSVGNKGIDLLTYSFPCQDLSTAGSFSKKAFGMKKGSGTRSGLLWEIERILFDLQKLNQLPQFLLLENVNNML
SKQHKLDYDMWTKSLKQLGYSTCTFQLNALDYGSAQRRKRVYAISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKT
NYKIEKYYQEAYLAQPNRTFSRIKYVIPKYDLLNPNCYCTSTITTRQDRFPNGGYINLKNTILGDDYREKDHNNLPKKAN
FRLLTNREAYLLMGFNEKDFEAIQAKGISKAKMYQQAGNSIVVDVMVYLMKLIQERFNK

Sequences:

>Translated_299_residues
MTGEQLIKSVGNKGIDLLTYSFPCQDLSTAGSFSKKAFGMKKGSGTRSGLL*EIERILFDLQKLNQLPQFLLLENVNNML
SKQHKLDYDM*TKSLKQLGYSTCTFQLNALDYGSAQRRKRVYAISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKT
NYKIEKYYQEAYLAQPNRTFSRIKYVIPKYDLLNPNCYCTSTITTRQDRFPNGGYINLKNTILGDDYREKDHNNLPKKAN
FRLLTNREAYLLMGFNEKDFEAIQAKGISKAKMYQQAGNSIVVDVMVYLMKLIQERFNK
>Mature_298_residues
TGEQLIKSVGNKGIDLLTYSFPCQDLSTAGSFSKKAFGMKKGSGTRSGLL*EIERILFDLQKLNQLPQFLLLENVNNMLS
KQHKLDYDM*TKSLKQLGYSTCTFQLNALDYGSAQRRKRVYAISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKTN
YKIEKYYQEAYLAQPNRTFSRIKYVIPKYDLLNPNCYCTSTITTRQDRFPNGGYINLKNTILGDDYREKDHNNLPKKANF
RLLTNREAYLLMGFNEKDFEAIQAKGISKAKMYQQAGNSIVVDVMVYLMKLIQERFNK

Specific function: This de-novo methylase methylates completely and exclusively CG residues in Spiroplasma strain MQ-1 DNA [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018117
- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 34079; Mature: 33948

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEQLIKSVGNKGIDLLTYSFPCQDLSTAGSFSKKAFGMKKGSGTRSGLLEIERILFDL
CCHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH
QKLNQLPQFLLLENVNNMLSKQHKLDYDMTKSLKQLGYSTCTFQLNALDYGSAQRRKRVY
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCEEE
AISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKTNYKIEKYYQEAYLAQPNRTFSR
EEEEECCCCEECCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
IKYVIPKYDLLNPNCYCTSTITTRQDRFPNGGYINLKNTILGDDYREKDHNNLPKKANFR
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCEE
LLTNREAYLLMGFNEKDFEAIQAKGISKAKMYQQAGNSIVVDVMVYLMKLIQERFNK
EEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGEQLIKSVGNKGIDLLTYSFPCQDLSTAGSFSKKAFGMKKGSGTRSGLLEIERILFDL
CHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH
QKLNQLPQFLLLENVNNMLSKQHKLDYDMTKSLKQLGYSTCTFQLNALDYGSAQRRKRVY
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCEEE
AISILNYDGLIDSNGNILDLEAPIFDGKQKQLKDVLKTNYKIEKYYQEAYLAQPNRTFSR
EEEEECCCCEECCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
IKYVIPKYDLLNPNCYCTSTITTRQDRFPNGGYINLKNTILGDDYREKDHNNLPKKANFR
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCEE
LLTNREAYLLMGFNEKDFEAIQAKGISKAKMYQQAGNSIVVDVMVYLMKLIQERFNK
EEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2181400 [H]