Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
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Accession | NC_002162 |
Length | 751,719 |
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Identifier: 13358065
GI number: 13358065
Start: 619506
End: 620327
Strand: Reverse
Name: Not Available
Synonym: UU502
Alternate gene names: NA
Gene position: 620327-619506 (Counterclockwise)
Preceding gene: 13358066
Following gene: 13358064
Centisome position: 82.52
GC content: 24.7
Gene sequence:
>822_bases ATGAGTGATAAGTCAACATTAAAACAAGAAAATACGATCGAATATCCCGTTGTTGGTGCACTAAGGCGTGCTAGCGCTAG TGTTTTAGATTATATTTTTATTTCCATTATTGCTTTTTTATTATCTTTATTAGTTTTTATTAATAGTAATTTTAAAATTA GTGATATTTTTGTTAATAATGATGAGCTTGCTCCTGAACCTTGACGTTTATTCTTAATGGGAATAATTGCTTTTTTTGTT TATTCTACATACTACATTATTATTCCTTTATTTTGTAAATCTTATACTTTATTTCGATGAGCATTTTCGATTAGAATGAT TAGTTTAGTAAAACAAAACGATAAAAAAATTTTATTTATTGCTTTAATTAAACATAGTTTATTAACTTGATTAATTTTTA CCATAATTAATTTATTAGCGATGGGATTTTGTTTTGTTTTTGCTGATGCAAGTTTTAAATCAATTCAAGCTATGAATGAG ACTGAGCTAAAAGAGTATTATCATCAAATTAAAGATTTAAAAGCTTATGTGCAGTCAATTTTATCTTTAAAAATTAATGA TAATTTCACCAATACTACAACTATGGCTATTTTAAGTATTTTAGTTAAAAGTCTATATTCAATTATGGGTTTAGTTAGTT GTATTATTGTAATTCACATGTTTATGAATTCAAAAAAACGTGCTTTACATGATCAAGTAGCAAAAGTTGTTTTATTATGG ATGCATTATGAGAAACCAAAACAAGCGCCTAAACATAAAACAAAACGTGAAGTTGAGATTCAAAAAATCGATAATTTAAT TCAAGAACTAGATAAAATATAA
Upstream 100 bases:
>100_bases AGAGATTTATTTTGCTAATTTTGAGAATAATTTATATGTTCGCAAGTTTAAAATTAATATTTTAAAATATTATTTAAAAT CAAAACAGGGATTAAATTAA
Downstream 100 bases:
>100_bases AATGAAAAATAAGGAGAAGCTTTTATGGGATTAGGAATTGATTATTCACGCTTAAATCAAGAACAAAAAGAAGCAGTTAC AGCAGACTTAGGACCGCAAT
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSDKSTLKQENTIEYPVVGALRRASASVLDYIFISIIAFLLSLLVFINSNFKISDIFVNNDELAPEPWRLFLMGIIAFFV YSTYYIIIPLFCKSYTLFRWAFSIRMISLVKQNDKKILFIALIKHSLLTWLIFTIINLLAMGFCFVFADASFKSIQAMNE TELKEYYHQIKDLKAYVQSILSLKINDNFTNTTTMAILSILVKSLYSIMGLVSCIIVIHMFMNSKKRALHDQVAKVVLLW MHYEKPKQAPKHKTKREVEIQKIDNLIQELDKI
Sequences:
>Translated_273_residues MSDKSTLKQENTIEYPVVGALRRASASVLDYIFISIIAFLLSLLVFINSNFKISDIFVNNDELAPEP*RLFLMGIIAFFV YSTYYIIIPLFCKSYTLFR*AFSIRMISLVKQNDKKILFIALIKHSLLT*LIFTIINLLAMGFCFVFADASFKSIQAMNE TELKEYYHQIKDLKAYVQSILSLKINDNFTNTTTMAILSILVKSLYSIMGLVSCIIVIHMFMNSKKRALHDQVAKVVLLW MHYEKPKQAPKHKTKREVEIQKIDNLIQELDKI >Mature_272_residues SDKSTLKQENTIEYPVVGALRRASASVLDYIFISIIAFLLSLLVFINSNFKISDIFVNNDELAPEP*RLFLMGIIAFFVY STYYIIIPLFCKSYTLFR*AFSIRMISLVKQNDKKILFIALIKHSLLT*LIFTIINLLAMGFCFVFADASFKSIQAMNET ELKEYYHQIKDLKAYVQSILSLKINDNFTNTTTMAILSILVKSLYSIMGLVSCIIVIHMFMNSKKRALHDQVAKVVLLWM HYEKPKQAPKHKTKREVEIQKIDNLIQELDKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31108; Mature: 30976
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSTLKQENTIEYPVVGALRRASASVLDYIFISIIAFLLSLLVFINSNFKISDIFVNN CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC DELAPEPRLFLMGIIAFFVYSTYYIIIPLFCKSYTLFRAFSIRMISLVKQNDKKILFIAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH IKHSLLTLIFTIINLLAMGFCFVFADASFKSIQAMNETELKEYYHQIKDLKAYVQSILSL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KINDNFTNTTTMAILSILVKSLYSIMGLVSCIIVIHMFMNSKKRALHDQVAKVVLLWMHY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC EKPKQAPKHKTKREVEIQKIDNLIQELDKI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDKSTLKQENTIEYPVVGALRRASASVLDYIFISIIAFLLSLLVFINSNFKISDIFVNN CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC DELAPEPRLFLMGIIAFFVYSTYYIIIPLFCKSYTLFRAFSIRMISLVKQNDKKILFIAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH IKHSLLTLIFTIINLLAMGFCFVFADASFKSIQAMNETELKEYYHQIKDLKAYVQSILSL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KINDNFTNTTTMAILSILVKSLYSIMGLVSCIIVIHMFMNSKKRALHDQVAKVVLLWMHY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC EKPKQAPKHKTKREVEIQKIDNLIQELDKI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA