Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358043

GI number: 13358043

Start: 553654

End: 555273

Strand: Direct

Name: Not Available

Synonym: UU480

Alternate gene names: NA

Gene position: 553654-555273 (Clockwise)

Preceding gene: 13358037

Following gene: 13358047

Centisome position: 73.65

GC content: 30.37

Gene sequence:

>1620_bases
ATGATAAAAAAACATATTAAAAAAATAGTAATTGGAGCTTTAAGTACACTAGCGTTCATCACAACAACAGTTGTAGCAAC
AGCTTGTGCAAAACACAATAATTCTGTTACTAAAAATAATGAACCAAACGTTAATGTTAAAGATGAAATAAGTTCTTCTA
ATAGTGAATTAAATGATTCACATTATTATTGAAAAGCGCCTAAATCTGATACAAGCGAAGGTTTTCAAACAATCCATAAA
AGTATGGTCGAAGATGGAAAACGTGCATTTTTATTACCAGGGTTTTCACAAAGCAATTATCTACAAGACGCAATAAAAAA
CGCTAAATTTGATAAAAATGCTGTTGGTTTTTTATTAGATACAGTTTATAATGCAAATAATGATCCTTCTTTATTTGATG
GTGCAAATCGTGTTGCAAGTGTTTATTTTAAAGTTGATGATGCTGCTTTTTTAGGAGGGATTGCTGCCGCTTATATGCTA
AATGCAAACCAAAACATTTTTGCAACAGATGGCCAACTTAACTGGGGAGGATATGTTGCTTTAAATGCTAAAAACACTAC
TAATTATTTAGCAGGATTTGCCTTGGGTATTGAATGAGCAAACAAGCATTTAGCAAACAAAAAAGTATTACAAGAAGGAA
GTAGTGAGTCTAAAACATGAATCAAAGTAAATGAGGTTCAAGCTTCACAAAGTAGTGCTGGAGGATTTGATGAAAATAAT
GAAAATGCTAAAAGAATCCTTAAGGAACTAATTTCTAAAAAAGCTGATTTAATTTTACCAGTAGCAATTACCCAAATGAG
TTTAGCAGTTAATGAAGCAATTAGCACAACTTCACACAAAGTAGCAATAATAGGCGTAGATACTGAACAAGAAAACGATA
AGACAATTAATAAAGAAGCAAATACTTTTAAAAATACTAATATAAGTGGAAATAAAAATGGCGTTATTCGTTTTTCAATT
GTTAAACGATTAGGAGTAGCAATTGAAAAATTACTAGAAAACGCTGTAAATGGTACTCAATTTCAAGGACATGTTAACAA
AATTGGTGATGAAATTGATGTTCACGATAAATATAAATTAGGTGTAAACACTGTAGGTTCACTAGTTGATGGTGTAGTAG
GAATCTCAGAATCTGCTTATCACTATTTAATTGATGCTTTTAATCTAGCACAAACAGATGAAACTAATAAAGTAAGTACA
TATGACCAATTAGTTCAAAAAATAATCCAAGATCCTTTATTTAAAAGTTTAAACCAAGATCCTAAAATTGATGGATATAT
AAACCCTAAAAATCTTGCTAACGCTAGGGGTAATGAAGGTGAATTAATAAATGGAAAAACAATTAGTCCAGAAGCAAATG
GGGGAACCATTTATAAAGCAACAAATGGTTCATATTATTACTATCCTGTTGCTAAATCAACATATACTGCACAAAATGCC
TCAACTATTTTTAAAGAAATATGAGATAAAGCTAAAAATGATGATGACAAACGTCGTTTAGTTGGTTTAATTTTATCCTT
CGCAGGCGCAAATGTTAAAGATGGAGGATATTCTGAAATTAGTTATGATGGCATGTTAGGTTTTTACGCAAAACATGGTA
TTAAAATTCCAAAATTATAA

Upstream 100 bases:

>100_bases
TAAAAATTTAAAATATGATATCATTTATACAGTATTTTTGGACAATTTAAAAAAAGTAAAATTGTTGGAATTTAAAAATA
AATAAAGGGAGAGTAGAAAT

Downstream 100 bases:

>100_bases
TCATCTAACATTTATATATAATTTTAATAAAACTATTCTGTTAACAAAATATATTCAGTATAAATATATCCATTTTTAAT
TTTTATAAAATCCAATACCT

Product: ATP/GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYYWKAPKSDTSEGFQTIHK
SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML
NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIEWANKHLANKKVLQEGSSESKTWIKVNEVQASQSSAGGFDENN
ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI
VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST
YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA
STIFKEIWDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL

Sequences:

>Translated_539_residues
MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYY*KAPKSDTSEGFQTIHK
SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML
NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIE*ANKHLANKKVLQEGSSESKT*IKVNEVQASQSSAGGFDENN
ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI
VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST
YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA
STIFKEI*DKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL
>Mature_539_residues
MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYY*KAPKSDTSEGFQTIHK
SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML
NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIE*ANKHLANKKVLQEGSSESKT*IKVNEVQASQSSAGGFDENN
ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI
VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST
YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA
STIFKEI*DKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T.pallidum tmpC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 58074; Mature: 58074

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
HYYKAPKSDTSEGFQTIHKSMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDT
CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHH
VYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYMLNANQNIFATDGQLNWGGYVAL
HHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCEEEECCEECCCCEEEE
NAKNTTNYLAGFALGIEANKHLANKKVLQEGSSESKTIKVNEVQASQSSAGGFDENNENA
ECCCCCHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHH
KRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTF
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHC
KNTNISGNKNGVIRFSIVKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVN
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCCCEECCHH
TVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVSTYDQLVQKIIQDPLFKSLNQDPKI
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNASTI
CCEECHHHHCCCCCCCCCEECCCEECCCCCCCEEEEECCCCEEEEECCCCEECCCHHHHH
FKEIDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
HYYKAPKSDTSEGFQTIHKSMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDT
CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHH
VYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYMLNANQNIFATDGQLNWGGYVAL
HHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCEEEECCEECCCCEEEE
NAKNTTNYLAGFALGIEANKHLANKKVLQEGSSESKTIKVNEVQASQSSAGGFDENNENA
ECCCCCHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHH
KRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTF
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHC
KNTNISGNKNGVIRFSIVKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVN
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCCCEECCHH
TVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVSTYDQLVQKIIQDPLFKSLNQDPKI
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNASTI
CCEECHHHHCCCCCCCCCEECCCEECCCCCCCEEEEECCCCEEEEECCCCEECCCHHHHH
FKEIDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]