| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358043
GI number: 13358043
Start: 553654
End: 555273
Strand: Direct
Name: Not Available
Synonym: UU480
Alternate gene names: NA
Gene position: 553654-555273 (Clockwise)
Preceding gene: 13358037
Following gene: 13358047
Centisome position: 73.65
GC content: 30.37
Gene sequence:
>1620_bases ATGATAAAAAAACATATTAAAAAAATAGTAATTGGAGCTTTAAGTACACTAGCGTTCATCACAACAACAGTTGTAGCAAC AGCTTGTGCAAAACACAATAATTCTGTTACTAAAAATAATGAACCAAACGTTAATGTTAAAGATGAAATAAGTTCTTCTA ATAGTGAATTAAATGATTCACATTATTATTGAAAAGCGCCTAAATCTGATACAAGCGAAGGTTTTCAAACAATCCATAAA AGTATGGTCGAAGATGGAAAACGTGCATTTTTATTACCAGGGTTTTCACAAAGCAATTATCTACAAGACGCAATAAAAAA CGCTAAATTTGATAAAAATGCTGTTGGTTTTTTATTAGATACAGTTTATAATGCAAATAATGATCCTTCTTTATTTGATG GTGCAAATCGTGTTGCAAGTGTTTATTTTAAAGTTGATGATGCTGCTTTTTTAGGAGGGATTGCTGCCGCTTATATGCTA AATGCAAACCAAAACATTTTTGCAACAGATGGCCAACTTAACTGGGGAGGATATGTTGCTTTAAATGCTAAAAACACTAC TAATTATTTAGCAGGATTTGCCTTGGGTATTGAATGAGCAAACAAGCATTTAGCAAACAAAAAAGTATTACAAGAAGGAA GTAGTGAGTCTAAAACATGAATCAAAGTAAATGAGGTTCAAGCTTCACAAAGTAGTGCTGGAGGATTTGATGAAAATAAT GAAAATGCTAAAAGAATCCTTAAGGAACTAATTTCTAAAAAAGCTGATTTAATTTTACCAGTAGCAATTACCCAAATGAG TTTAGCAGTTAATGAAGCAATTAGCACAACTTCACACAAAGTAGCAATAATAGGCGTAGATACTGAACAAGAAAACGATA AGACAATTAATAAAGAAGCAAATACTTTTAAAAATACTAATATAAGTGGAAATAAAAATGGCGTTATTCGTTTTTCAATT GTTAAACGATTAGGAGTAGCAATTGAAAAATTACTAGAAAACGCTGTAAATGGTACTCAATTTCAAGGACATGTTAACAA AATTGGTGATGAAATTGATGTTCACGATAAATATAAATTAGGTGTAAACACTGTAGGTTCACTAGTTGATGGTGTAGTAG GAATCTCAGAATCTGCTTATCACTATTTAATTGATGCTTTTAATCTAGCACAAACAGATGAAACTAATAAAGTAAGTACA TATGACCAATTAGTTCAAAAAATAATCCAAGATCCTTTATTTAAAAGTTTAAACCAAGATCCTAAAATTGATGGATATAT AAACCCTAAAAATCTTGCTAACGCTAGGGGTAATGAAGGTGAATTAATAAATGGAAAAACAATTAGTCCAGAAGCAAATG GGGGAACCATTTATAAAGCAACAAATGGTTCATATTATTACTATCCTGTTGCTAAATCAACATATACTGCACAAAATGCC TCAACTATTTTTAAAGAAATATGAGATAAAGCTAAAAATGATGATGACAAACGTCGTTTAGTTGGTTTAATTTTATCCTT CGCAGGCGCAAATGTTAAAGATGGAGGATATTCTGAAATTAGTTATGATGGCATGTTAGGTTTTTACGCAAAACATGGTA TTAAAATTCCAAAATTATAA
Upstream 100 bases:
>100_bases TAAAAATTTAAAATATGATATCATTTATACAGTATTTTTGGACAATTTAAAAAAAGTAAAATTGTTGGAATTTAAAAATA AATAAAGGGAGAGTAGAAAT
Downstream 100 bases:
>100_bases TCATCTAACATTTATATATAATTTTAATAAAACTATTCTGTTAACAAAATATATTCAGTATAAATATATCCATTTTTAAT TTTTATAAAATCCAATACCT
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYYWKAPKSDTSEGFQTIHK SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIEWANKHLANKKVLQEGSSESKTWIKVNEVQASQSSAGGFDENN ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA STIFKEIWDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL
Sequences:
>Translated_539_residues MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYY*KAPKSDTSEGFQTIHK SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIE*ANKHLANKKVLQEGSSESKT*IKVNEVQASQSSAGGFDENN ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA STIFKEI*DKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL >Mature_539_residues MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDSHYY*KAPKSDTSEGFQTIHK SMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDTVYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYML NANQNIFATDGQLNWGGYVALNAKNTTNYLAGFALGIE*ANKHLANKKVLQEGSSESKT*IKVNEVQASQSSAGGFDENN ENAKRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTFKNTNISGNKNGVIRFSI VKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVNTVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVST YDQLVQKIIQDPLFKSLNQDPKIDGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNA STIFKEI*DKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To T.pallidum tmpC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 58074; Mature: 58074
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCC HYYKAPKSDTSEGFQTIHKSMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDT CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHH VYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYMLNANQNIFATDGQLNWGGYVAL HHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCEEEECCEECCCCEEEE NAKNTTNYLAGFALGIEANKHLANKKVLQEGSSESKTIKVNEVQASQSSAGGFDENNENA ECCCCCHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHH KRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTF HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHC KNTNISGNKNGVIRFSIVKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVN CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCCCEECCHH TVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVSTYDQLVQKIIQDPLFKSLNQDPKI HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC DGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNASTI CCEECHHHHCCCCCCCCCEECCCEECCCCCCCEEEEECCCCEEEEECCCCEECCCHHHHH FKEIDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCC >Mature Secondary Structure MIKKHIKKIVIGALSTLAFITTTVVATACAKHNNSVTKNNEPNVNVKDEISSSNSELNDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCC HYYKAPKSDTSEGFQTIHKSMVEDGKRAFLLPGFSQSNYLQDAIKNAKFDKNAVGFLLDT CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHH VYNANNDPSLFDGANRVASVYFKVDDAAFLGGIAAAYMLNANQNIFATDGQLNWGGYVAL HHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHEECCCCCEEEECCEECCCCEEEE NAKNTTNYLAGFALGIEANKHLANKKVLQEGSSESKTIKVNEVQASQSSAGGFDENNENA ECCCCCHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHH KRILKELISKKADLILPVAITQMSLAVNEAISTTSHKVAIIGVDTEQENDKTINKEANTF HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHC KNTNISGNKNGVIRFSIVKRLGVAIEKLLENAVNGTQFQGHVNKIGDEIDVHDKYKLGVN CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCCCEECCHH TVGSLVDGVVGISESAYHYLIDAFNLAQTDETNKVSTYDQLVQKIIQDPLFKSLNQDPKI HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC DGYINPKNLANARGNEGELINGKTISPEANGGTIYKATNGSYYYYPVAKSTYTAQNASTI CCEECHHHHCCCCCCCCCEECCCEECCCCCCCEEEEECCCCEEEEECCCCEECCCHHHHH FKEIDKAKNDDDKRRLVGLILSFAGANVKDGGYSEISYDGMLGFYAKHGIKIPKL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]