| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is mod
Identifier: 13358040
GI number: 13358040
Start: 548525
End: 549607
Strand: Reverse
Name: mod
Synonym: UU477
Alternate gene names: 13358040
Gene position: 549607-548525 (Counterclockwise)
Preceding gene: 13358041
Following gene: 13358039
Centisome position: 73.11
GC content: 23.55
Gene sequence:
>1083_bases ATGATGAACGAACGTTTAAAATTAGCTAAAAACTTACTTAAAAATGATGGTGTAATTTTTGTATCCATTGACGATAATGA ACAAGCATACTTAAAAGTTTTGATGGATGAAATTTTTGGCGAAGAGAATTTTGTTACAAATTTTATTTGGCAAAAGAAAT CTGGTGGTGGTTTGAATAAATTAATATATGAAGGCCATGAGTATATATTATGTTATTCAAAAAATAATTACAATTTTTGT CTTTCTGAAAAAAATAAAAAAATGAGTGGTTTTATTAAATATAAAGATAAAAACAATAATTCTTTTTTTATAAATAGCGA TATTATTAGAAATAATTTTGGAAAAAAAGATAATAAATTCGAACATAGAAACAAAGCTTATGAAGATTTATCTAAAGAAG ATAAAGAAAAATGAAATTTAAAATTAGATAATAAAAATTATATTTTAGTTCCATTTAAAAAAGAGCCAGGAAAGCATTTA GTAGCAAAAATATTTAATGATGAAAGAAAAACTACTTATAGCATAATTAAACTTCCATTTACTTTTGTGTCAGGTATTTG AACTAAAGATGGAAATAATGAAGTTGATTCATTAAATATAGATTTTCAAAACCCAAAACCAATTCAATTGATAATGCATT TATTAGATTTACATTCCAATAAAAATGCTCGTGTTTTAGATTTCTTCGCAGGATCTGGAACAACTGGTCATGCAGTATTA GAATTAAATAAAGAAGATGGTGGAAATCGAACATTCACATTAATAACAAACAATGAAAATCAAATAGGCACTAATGTTTG TTATGAACGCTTATATCGTATCAACAATGGTATTGGAACTAAAAACGAAATCGATTTTGATTGAGTTAGTAAAAATAAAC CATATTTAAATAAACTAAATGTTTATGATTTAAAATATTTTGACACTAATCCAATTGAAGTTGATAATAGCAAGATTAAA AAAGTATTTGCTAAAATGTTAGTTGATTTTAATAATACAAGTCAATCAAGTTTATTTGAAAATAACCAACGCGAATTATT AATTAATTTAAGTACACTAAAACCAATTGAAAAAAAGGAATAA
Upstream 100 bases:
>100_bases AGCAAGCAAGACTGATGGTAATAATTTTAGCGAAAAAGATGATGTAGTTGCATCTAAGTTTGTTTATCGTGATAAATTTA GTCGCAATGGTTGATTAAAT
Downstream 100 bases:
>100_bases AATTTATGAAATTAACCAAATCACAACAAAAAGCTGTTAGTCAATTAGTTAATTGTTATTTAGAAAGCGTGAATAACAAT AAAAAAGAAATTATTGATTT
Product: adenine specific DNA methyltransferase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MMNERLKLAKNLLKNDGVIFVSIDDNEQAYLKVLMDEIFGEENFVTNFIWQKKSGGGLNKLIYEGHEYILCYSKNNYNFC LSEKNKKMSGFIKYKDKNNNSFFINSDIIRNNFGKKDNKFEHRNKAYEDLSKEDKEKWNLKLDNKNYILVPFKKEPGKHL VAKIFNDERKTTYSIIKLPFTFVSGIWTKDGNNEVDSLNIDFQNPKPIQLIMHLLDLHSNKNARVLDFFAGSGTTGHAVL ELNKEDGGNRTFTLITNNENQIGTNVCYERLYRINNGIGTKNEIDFDWVSKNKPYLNKLNVYDLKYFDTNPIEVDNSKIK KVFAKMLVDFNNTSQSSLFENNQRELLINLSTLKPIEKKE
Sequences:
>Translated_360_residues MMNERLKLAKNLLKNDGVIFVSIDDNEQAYLKVLMDEIFGEENFVTNFIWQKKSGGGLNKLIYEGHEYILCYSKNNYNFC LSEKNKKMSGFIKYKDKNNNSFFINSDIIRNNFGKKDNKFEHRNKAYEDLSKEDKEK*NLKLDNKNYILVPFKKEPGKHL VAKIFNDERKTTYSIIKLPFTFVSGI*TKDGNNEVDSLNIDFQNPKPIQLIMHLLDLHSNKNARVLDFFAGSGTTGHAVL ELNKEDGGNRTFTLITNNENQIGTNVCYERLYRINNGIGTKNEIDFD*VSKNKPYLNKLNVYDLKYFDTNPIEVDNSKIK KVFAKMLVDFNNTSQSSLFENNQRELLINLSTLKPIEKKE >Mature_360_residues MMNERLKLAKNLLKNDGVIFVSIDDNEQAYLKVLMDEIFGEENFVTNFIWQKKSGGGLNKLIYEGHEYILCYSKNNYNFC LSEKNKKMSGFIKYKDKNNNSFFINSDIIRNNFGKKDNKFEHRNKAYEDLSKEDKEK*NLKLDNKNYILVPFKKEPGKHL VAKIFNDERKTTYSIIKLPFTFVSGI*TKDGNNEVDSLNIDFQNPKPIQLIMHLLDLHSNKNARVLDFFAGSGTTGHAVL ELNKEDGGNRTFTLITNNENQIGTNVCYERLYRINNGIGTKNEIDFD*VSKNKPYLNKLNVYDLKYFDTNPIEVDNSKIK KVFAKMLVDFNNTSQSSLFENNQRELLINLSTLKPIEKKE
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 41365; Mature: 41365
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNERLKLAKNLLKNDGVIFVSIDDNEQAYLKVLMDEIFGEENFVTNFIWQKKSGGGLNK CCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHH LIYEGHEYILCYSKNNYNFCLSEKNKKMSGFIKYKDKNNNSFFINSDIIRNNFGKKDNKF HEECCCEEEEEEECCCCEEEECCCCCCEEEEEEEEECCCCEEEEECHHHHCCCCCCCCCH EHRNKAYEDLSKEDKEKNLKLDNKNYILVPFKKEPGKHLVAKIFNDERKTTYSIIKLPFT HHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECHH FVSGITKDGNNEVDSLNIDFQNPKPIQLIMHLLDLHSNKNARVLDFFAGSGTTGHAVLEL HHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEE NKEDGGNRTFTLITNNENQIGTNVCYERLYRINNGIGTKNEIDFDVSKNKPYLNKLNVYD ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE LKYFDTNPIEVDNSKIKKVFAKMLVDFNNTSQSSLFENNQRELLINLSTLKPIEKKE EEEECCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEEHHCCCCCCCC >Mature Secondary Structure MMNERLKLAKNLLKNDGVIFVSIDDNEQAYLKVLMDEIFGEENFVTNFIWQKKSGGGLNK CCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHH LIYEGHEYILCYSKNNYNFCLSEKNKKMSGFIKYKDKNNNSFFINSDIIRNNFGKKDNKF HEECCCEEEEEEECCCCEEEECCCCCCEEEEEEEEECCCCEEEEECHHHHCCCCCCCCCH EHRNKAYEDLSKEDKEKNLKLDNKNYILVPFKKEPGKHLVAKIFNDERKTTYSIIKLPFT HHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECHH FVSGITKDGNNEVDSLNIDFQNPKPIQLIMHLLDLHSNKNARVLDFFAGSGTTGHAVLEL HHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEE NKEDGGNRTFTLITNNENQIGTNVCYERLYRINNGIGTKNEIDFDVSKNKPYLNKLNVYD ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE LKYFDTNPIEVDNSKIKKVFAKMLVDFNNTSQSSLFENNQRELLINLSTLKPIEKKE EEEECCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEEHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]