Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358025

GI number: 13358025

Start: 526059

End: 526877

Strand: Reverse

Name: Not Available

Synonym: UU462

Alternate gene names: NA

Gene position: 526877-526059 (Counterclockwise)

Preceding gene: 13358026

Following gene: 13358024

Centisome position: 70.09

GC content: 25.64

Gene sequence:

>819_bases
ATGAATTTAAGGCATTCAAAAACTACTTGATTTAGAAAACCCTTTGAAACTAATACACGTTTTAAATCACCTCTTTTATA
TAAATTTTTAATTACATCATTTTTTGTTGTCATTCCAATGATTGTTTTTTTTATTTTATATGGTGAAATCAATCTTTTAG
GTTTTAATGGAATAATTGGTGTTAATGGTCGTTGATATGGAAAAGGTTTTAAATTAGATGAAAACCAACAATGGATTGTA
GGAGTTAAAGATTTTTATCATTGAAATCCTATTGTATATGATCAATTAAAACCAAAACCGGGTCCTCTTATGATTGAAAG
AATGCAAAAATTAGTTAATGAAATTACTAATCAATACAATCATGGTGTTGAATTTGGTACAAATATAATTAGTTCATATC
CAGTTTGAGTTGCAATGTTTTCAACTTTAGGATTAGCAGTTATTGTATGTATTATATTTGCTTTTAGTACGCCAAAGATT
CGTTGAGACATTCTTACGCCAGTAGTTTCATGTTGATTTGGAATGTTTATTTTAATTATTTCTGGATTTATTCCTAGTCA
AATTTGAGGATATTTAGTACGATTTTTAATTTTAGTAGTTGCTTTTATTTTACCAATTTTTATCATGACAAAAATTACAA
ATGCTATTATGAATCGCTCAAAACATTTTGAGACATATGCTGCAGATCTATACAATGAACTTAAAGATTCAGAACAATAT
TATAATGAATTTAACAAAAAACGTTTAGAATTAAAAAAGCGTAATAAAGCAAATGAACGAATAAAATATAAAGTTGAAGA
TGATCAAAAAGGAAAATAA

Upstream 100 bases:

>100_bases
TTTATTGAATGGGAAAAACCCTTTTATTAATTAAAATATAGTAAATTGTTATAATTTAATCATATTGATTACCAACCATT
TATTAAAGAAAGGACAGTAA

Downstream 100 bases:

>100_bases
GCATGGCATTTATTGATAAATGTAAAATCGTATTGATTGCAGGTAATGGTGGGGATGGAATTGTTTCATGACGTCGTGAA
ACTCATGTTCCAGAAGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNLRHSKTTWFRKPFETNTRFKSPLLYKFLITSFFVVIPMIVFFILYGEINLLGFNGIIGVNGRWYGKGFKLDENQQWIV
GVKDFYHWNPIVYDQLKPKPGPLMIERMQKLVNEITNQYNHGVEFGTNIISSYPVWVAMFSTLGLAVIVCIIFAFSTPKI
RWDILTPVVSCWFGMFILIISGFIPSQIWGYLVRFLILVVAFILPIFIMTKITNAIMNRSKHFETYAADLYNELKDSEQY
YNEFNKKRLELKKRNKANERIKYKVEDDQKGK

Sequences:

>Translated_272_residues
MNLRHSKTT*FRKPFETNTRFKSPLLYKFLITSFFVVIPMIVFFILYGEINLLGFNGIIGVNGR*YGKGFKLDENQQWIV
GVKDFYH*NPIVYDQLKPKPGPLMIERMQKLVNEITNQYNHGVEFGTNIISSYPV*VAMFSTLGLAVIVCIIFAFSTPKI
R*DILTPVVSC*FGMFILIISGFIPSQI*GYLVRFLILVVAFILPIFIMTKITNAIMNRSKHFETYAADLYNELKDSEQY
YNEFNKKRLELKKRNKANERIKYKVEDDQKGK
>Mature_272_residues
MNLRHSKTT*FRKPFETNTRFKSPLLYKFLITSFFVVIPMIVFFILYGEINLLGFNGIIGVNGR*YGKGFKLDENQQWIV
GVKDFYH*NPIVYDQLKPKPGPLMIERMQKLVNEITNQYNHGVEFGTNIISSYPV*VAMFSTLGLAVIVCIIFAFSTPKI
R*DILTPVVSC*FGMFILIISGFIPSQI*GYLVRFLILVVAFILPIFIMTKITNAIMNRSKHFETYAADLYNELKDSEQY
YNEFNKKRLELKKRNKANERIKYKVEDDQKGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30621; Mature: 30621

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRHSKTTFRKPFETNTRFKSPLLYKFLITSFFVVIPMIVFFILYGEINLLGFNGIIGV
CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCEEEC
NGRYGKGFKLDENQQWIVGVKDFYHNPIVYDQLKPKPGPLMIERMQKLVNEITNQYNHGV
CCCCCCCCCCCCCCCEEEEHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
EFGTNIISSYPVVAMFSTLGLAVIVCIIFAFSTPKIRDILTPVVSCFGMFILIISGFIPS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIGYLVRFLILVVAFILPIFIMTKITNAIMNRSKHFETYAADLYNELKDSEQYYNEFNKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLELKKRNKANERIKYKVEDDQKGK
HHHHHHHCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNLRHSKTTFRKPFETNTRFKSPLLYKFLITSFFVVIPMIVFFILYGEINLLGFNGIIGV
CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCEEEC
NGRYGKGFKLDENQQWIVGVKDFYHNPIVYDQLKPKPGPLMIERMQKLVNEITNQYNHGV
CCCCCCCCCCCCCCCEEEEHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
EFGTNIISSYPVVAMFSTLGLAVIVCIIFAFSTPKIRDILTPVVSCFGMFILIISGFIPS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIGYLVRFLILVVAFILPIFIMTKITNAIMNRSKHFETYAADLYNELKDSEQYYNEFNKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLELKKRNKANERIKYKVEDDQKGK
HHHHHHHCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA