| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358014
GI number: 13358014
Start: 511550
End: 512566
Strand: Reverse
Name: Not Available
Synonym: UU451
Alternate gene names: NA
Gene position: 512566-511550 (Counterclockwise)
Preceding gene: 13358015
Following gene: 13358013
Centisome position: 68.19
GC content: 26.55
Gene sequence:
>1017_bases ATGGGATTATTTAGTAAGAAAAATAAATTAAATCAAAAGTTAACTGAAGATAAAAATATAAATATTACTGATGTTTTAGA TAATAACAAAGATATTTATCAATTATATGATGAAACTATTGTTACTAAAAAAGTTAAAGTAAGATGCAAAAATTGTGGCG TTTTTATGTGAGTTGATTACACAAAAACGATTAAAAGTTTACGTAATTTAGCTTTAACAAACATCCAACAAGAACAAATA CCTGTAATGGATGAACCACAAATTTTACAAGATTGCAATGATCTATCATCAGCTCCAGTTAATAACCAAGAAGATGATAT TGTTAACGAACATGAATCTACACCTATTGAACCATTACATGAAGAAGTTGAACCTGAGCCTATAAAGAACGAAAATCAAA GCAATGAAGAATTTATACAGGAGAATATTGTAGCTCCAGTTGATGAAGTTGATAATTCAGTAAAAGAACATACACCTTTT ACTCCTGTTTCTTTTGAATTTGAAGAACCTGTTTTTGAAAATATTTATTCAAACCAAAAAGTGTATGCTGAAAATTTATT TTTAGAATCTTTATTTTCTGAAAAAGAAAGTTTAATTAATGATGATCAAAATGATTTTAGTTGGTTATCAAAGTATGTAA GTGTTTGAAATAAACGTGATGAAGCTGAACTAGCACAACTAGTTTATGATGAATGTTTATTAGCACCTCAAAGTTCAGTA TTTCCTAATAATGAATACTTTATAGAAGAAGAATATGAACATATTGATCCAGATAATCACCATAATAAACATAAAGCGCA ACGTCATCATCGTGGCCATGATTTAATTGTTAAAAAAAATGGAAAAGAACAAATAGAAAAAGCAATTGATGATGTTTTAC CCATTAATAATGGTTTAGATAAAAAACAACAATTATTATTAAAAACAGTATTAATTGAAGAAGAATTTCAAAGTGATCCA ATTTCGAAAAAAACATGATGAGAAACTGAATCAGCAAACAAATCATCAAAAAAGTAA
Upstream 100 bases:
>100_bases TTAGATTTAATAAATGAAATAAAAAAGTTTATTTTCATATATAATTTAAGTTAGTTAAAGAAGTTAAAATTATAAAAATA ATTAATTTTGGAGTTGAATT
Downstream 100 bases:
>100_bases AATTTTTAGAAGGGGGTGCCCTTCTTTTTTATTAGGAATAAAATTATATAATTAAATTACTAGAATAAGGATTTTTAAAA TGGATAATAATATTAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MGLFSKKNKLNQKLTEDKNINITDVLDNNKDIYQLYDETIVTKKVKVRCKNCGVFMWVDYTKTIKSLRNLALTNIQQEQI PVMDEPQILQDCNDLSSAPVNNQEDDIVNEHESTPIEPLHEEVEPEPIKNENQSNEEFIQENIVAPVDEVDNSVKEHTPF TPVSFEFEEPVFENIYSNQKVYAENLFLESLFSEKESLINDDQNDFSWLSKYVSVWNKRDEAELAQLVYDECLLAPQSSV FPNNEYFIEEEYEHIDPDNHHNKHKAQRHHRGHDLIVKKNGKEQIEKAIDDVLPINNGLDKKQQLLLKTVLIEEEFQSDP ISKKTWWETESANKSSKK
Sequences:
>Translated_338_residues MGLFSKKNKLNQKLTEDKNINITDVLDNNKDIYQLYDETIVTKKVKVRCKNCGVFM*VDYTKTIKSLRNLALTNIQQEQI PVMDEPQILQDCNDLSSAPVNNQEDDIVNEHESTPIEPLHEEVEPEPIKNENQSNEEFIQENIVAPVDEVDNSVKEHTPF TPVSFEFEEPVFENIYSNQKVYAENLFLESLFSEKESLINDDQNDFSWLSKYVSV*NKRDEAELAQLVYDECLLAPQSSV FPNNEYFIEEEYEHIDPDNHHNKHKAQRHHRGHDLIVKKNGKEQIEKAIDDVLPINNGLDKKQQLLLKTVLIEEEFQSDP ISKKT**ETESANKSSKK >Mature_337_residues GLFSKKNKLNQKLTEDKNINITDVLDNNKDIYQLYDETIVTKKVKVRCKNCGVFM*VDYTKTIKSLRNLALTNIQQEQIP VMDEPQILQDCNDLSSAPVNNQEDDIVNEHESTPIEPLHEEVEPEPIKNENQSNEEFIQENIVAPVDEVDNSVKEHTPFT PVSFEFEEPVFENIYSNQKVYAENLFLESLFSEKESLINDDQNDFSWLSKYVSV*NKRDEAELAQLVYDECLLAPQSSVF PNNEYFIEEEYEHIDPDNHHNKHKAQRHHRGHDLIVKKNGKEQIEKAIDDVLPINNGLDKKQQLLLKTVLIEEEFQSDPI SKKT**ETESANKSSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38648; Mature: 38517
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFSKKNKLNQKLTEDKNINITDVLDNNKDIYQLYDETIVTKKVKVRCKNCGVFMVDYT CCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH KTIKSLRNLALTNIQQEQIPVMDEPQILQDCNDLSSAPVNNQEDDIVNEHESTPIEPLHE HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHH EVEPEPIKNENQSNEEFIQENIVAPVDEVDNSVKEHTPFTPVSFEFEEPVFENIYSNQKV HCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHH YAENLFLESLFSEKESLINDDQNDFSWLSKYVSVNKRDEAELAQLVYDECLLAPQSSVFP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC NNEYFIEEEYEHIDPDNHHNKHKAQRHHRGHDLIVKKNGKEQIEKAIDDVLPINNGLDKK CCCEEECCHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHH QQLLLKTVLIEEEFQSDPISKKTETESANKSSKK HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure GLFSKKNKLNQKLTEDKNINITDVLDNNKDIYQLYDETIVTKKVKVRCKNCGVFMVDYT CCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH KTIKSLRNLALTNIQQEQIPVMDEPQILQDCNDLSSAPVNNQEDDIVNEHESTPIEPLHE HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHH EVEPEPIKNENQSNEEFIQENIVAPVDEVDNSVKEHTPFTPVSFEFEEPVFENIYSNQKV HCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHH YAENLFLESLFSEKESLINDDQNDFSWLSKYVSVNKRDEAELAQLVYDECLLAPQSSVFP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC NNEYFIEEEYEHIDPDNHHNKHKAQRHHRGHDLIVKKNGKEQIEKAIDDVLPINNGLDKK CCCEEECCHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHH QQLLLKTVLIEEEFQSDPISKKTETESANKSSKK HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA