| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357988
GI number: 13357988
Start: 488695
End: 489372
Strand: Direct
Name: Not Available
Synonym: UU425
Alternate gene names: NA
Gene position: 488695-489372 (Clockwise)
Preceding gene: 13357986
Following gene: 13357989
Centisome position: 65.01
GC content: 21.09
Gene sequence:
>678_bases ATGGCAACTAGCAATGATTTACTAATTTATTCTAATTTAAAACAAACACCTAAATACCAAATAGATAATAAAAAACTAAA AGAAGATTTTGTTAAAAATAATAATTGACTAAGCGAAAATGTTGATTATCATTTAAGTATTTTTAAAGATATTAAATATG ATTTTTATCTAAGCCATTGGTGTTATCAATATTGAATTGATCAAAATCGTTTAGATGTTATTTTAAAACTAATTTATAAT GCTAATAAAATAATTTTATACCCGAATGGAAATGCTGAATTATATTATGTTGCAAATTATTACGCACAGGCAATTAAAAA TTTAATTAGGGAAGATCCCCATTTATCAAAACAAAAGATTAATGATCATTTAAATAATTTTATTAATATGAAATCATTTT TAGAAGCAAAAAATTATTTTAGTTCACAATTAAATAATAATAAAGATTGATTAACAGTTTTTGTCTTAAATAAGTTGTTT AAAATTTTTACAATTGGTGAAAGTTGAGTCGATTCTAAGTACTTTAGTTTTAATAAGGAACTAATGCCTAAATCTTATAA AATTCGCACAAATTATGCAAGCGTACTAAATTCACTAAATTTATCATTAGATGCTAAAAATCAATTTAAAAAAAAAATTT TGAGCACACTTTTAGAATATACAATAAAACATTTTTAG
Upstream 100 bases:
>100_bases TTCTAATAAATATTTAACAAACCAAGCAATTTCTAAGGATACAAGAGTTAATTGAATATCTGTTATTAACCAATATGCGA ATAATAATGAACATAATTTA
Downstream 100 bases:
>100_bases ATTTTATTATTGATGGTAAACAATACTATGATCCTAAAAAGCAAAACTTAATTTTTATGGGTTCTTCACTATTTAAAAAT AATGTTTTAAAAGATCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MATSNDLLIYSNLKQTPKYQIDNKKLKEDFVKNNNWLSENVDYHLSIFKDIKYDFYLSHWCYQYWIDQNRLDVILKLIYN ANKIILYPNGNAELYYVANYYAQAIKNLIREDPHLSKQKINDHLNNFINMKSFLEAKNYFSSQLNNNKDWLTVFVLNKLF KIFTIGESWVDSKYFSFNKELMPKSYKIRTNYASVLNSLNLSLDAKNQFKKKILSTLLEYTIKHF
Sequences:
>Translated_225_residues MATSNDLLIYSNLKQTPKYQIDNKKLKEDFVKNNN*LSENVDYHLSIFKDIKYDFYLSHWCYQY*IDQNRLDVILKLIYN ANKIILYPNGNAELYYVANYYAQAIKNLIREDPHLSKQKINDHLNNFINMKSFLEAKNYFSSQLNNNKD*LTVFVLNKLF KIFTIGES*VDSKYFSFNKELMPKSYKIRTNYASVLNSLNLSLDAKNQFKKKILSTLLEYTIKHF >Mature_224_residues ATSNDLLIYSNLKQTPKYQIDNKKLKEDFVKNNN*LSENVDYHLSIFKDIKYDFYLSHWCYQY*IDQNRLDVILKLIYNA NKIILYPNGNAELYYVANYYAQAIKNLIREDPHLSKQKINDHLNNFINMKSFLEAKNYFSSQLNNNKD*LTVFVLNKLFK IFTIGES*VDSKYFSFNKELMPKSYKIRTNYASVLNSLNLSLDAKNQFKKKILSTLLEYTIKHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26172; Mature: 26041
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSNDLLIYSNLKQTPKYQIDNKKLKEDFVKNNNLSENVDYHLSIFKDIKYDFYLSHWC CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YQYIDQNRLDVILKLIYNANKIILYPNGNAELYYVANYYAQAIKNLIREDPHLSKQKIND HHHHCCCHHHHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH HLNNFINMKSFLEAKNYFSSQLNNNKDLTVFVLNKLFKIFTIGESVDSKYFSFNKELMPK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCC SYKIRTNYASVLNSLNLSLDAKNQFKKKILSTLLEYTIKHF CEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATSNDLLIYSNLKQTPKYQIDNKKLKEDFVKNNNLSENVDYHLSIFKDIKYDFYLSHWC CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YQYIDQNRLDVILKLIYNANKIILYPNGNAELYYVANYYAQAIKNLIREDPHLSKQKIND HHHHCCCHHHHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHH HLNNFINMKSFLEAKNYFSSQLNNNKDLTVFVLNKLFKIFTIGESVDSKYFSFNKELMPK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCC SYKIRTNYASVLNSLNLSLDAKNQFKKKILSTLLEYTIKHF CEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA