Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357986

GI number: 13357986

Start: 487280

End: 488089

Strand: Direct

Name: Not Available

Synonym: UU424

Alternate gene names: NA

Gene position: 487280-488089 (Clockwise)

Preceding gene: 13357985

Following gene: 13357988

Centisome position: 64.82

GC content: 20.99

Gene sequence:

>810_bases
ATGGTTTGCATCATTTTAAAAATAAAAAAGGGAATGTTAAAGATAATGAATAATAATAAAAGCTACATTAAAAAATATTT
TGATGATATTTTAATACAGGCTAAACAGGTTTTAAAAAAACATGATTATGCGTATGCATATGATTTAATTTCTAATGAAT
TTAATAATCCATTAATTGATTTAAAAACTTTACAAGAATTTGAAGCATTTGCTATAGAAATTAAAAAAAGTGCCGAACTT
AACTTTATTGATGAAAATGAGGCAAAATTAGCTAAAACAGATTTTTATTGTAAAATTCATGATCCAAAAACAACTTATGT
TAGTTTAGCATATTTAGAAACTTTTTTAATGCGTTTCATTAATGAAATGGATGAATTAGATATTACATTTTTAAATAGCT
TGCTAACAAATAAATTAATTAATGGATCAACAAAATTAGATATTTTAGATTTATTAGCAACTAATAATATTGATCAAAAT
TTTAATTTTTACAATAAATATTTAAAACAAACAAAAAATGTTAACCCTGTTAATTTTAATAACCATTACCAAGAAATTGA
CCAAATTCAAAATTATCTAAATAAGTATTTAGCTAAAAATCCTTCTTTATTACATTTAGCCAATAAATTATTAATGATGT
ACATTACATATTATTTTCCATTTAAATTTGCACATAATCATAATTTAATTGCTAAAACAATTATTGATTATGTAAAAAAT
GCTATGGAAAATCATGTTTGTCAGTATAGTGAAGAACAAAAAGCTATTGTGGCTTGTATTAATAAAATTTTAGAAGAAGA
GCAAGTATAA

Upstream 100 bases:

>100_bases
AAACTACACGTTTTAGATGATATTGATGATTTTAAAACTAATTTTAATAAACACACTAATGAATGAAATTATAATTTAAA
AAAACATTTTAATAAAAAAA

Downstream 100 bases:

>100_bases
AGTTATTTAAATTTGTTAAAATAAAATAAACAAATAATTAGAATATTTTAGGCAAGCATTTTGAGATCAAAATGAAGTAT
ATTAATTATTATGTTAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MVCIILKIKKGMLKIMNNNKSYIKKYFDDILIQAKQVLKKHDYAYAYDLISNEFNNPLIDLKTLQEFEAFAIEIKKSAEL
NFIDENEAKLAKTDFYCKIHDPKTTYVSLAYLETFLMRFINEMDELDITFLNSLLTNKLINGSTKLDILDLLATNNIDQN
FNFYNKYLKQTKNVNPVNFNNHYQEIDQIQNYLNKYLAKNPSLLHLANKLLMMYITYYFPFKFAHNHNLIAKTIIDYVKN
AMENHVCQYSEEQKAIVACINKILEEEQV

Sequences:

>Translated_269_residues
MVCIILKIKKGMLKIMNNNKSYIKKYFDDILIQAKQVLKKHDYAYAYDLISNEFNNPLIDLKTLQEFEAFAIEIKKSAEL
NFIDENEAKLAKTDFYCKIHDPKTTYVSLAYLETFLMRFINEMDELDITFLNSLLTNKLINGSTKLDILDLLATNNIDQN
FNFYNKYLKQTKNVNPVNFNNHYQEIDQIQNYLNKYLAKNPSLLHLANKLLMMYITYYFPFKFAHNHNLIAKTIIDYVKN
AMENHVCQYSEEQKAIVACINKILEEEQV
>Mature_269_residues
MVCIILKIKKGMLKIMNNNKSYIKKYFDDILIQAKQVLKKHDYAYAYDLISNEFNNPLIDLKTLQEFEAFAIEIKKSAEL
NFIDENEAKLAKTDFYCKIHDPKTTYVSLAYLETFLMRFINEMDELDITFLNSLLTNKLINGSTKLDILDLLATNNIDQN
FNFYNKYLKQTKNVNPVNFNNHYQEIDQIQNYLNKYLAKNPSLLHLANKLLMMYITYYFPFKFAHNHNLIAKTIIDYVKN
AMENHVCQYSEEQKAIVACINKILEEEQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31741; Mature: 31741

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCIILKIKKGMLKIMNNNKSYIKKYFDDILIQAKQVLKKHDYAYAYDLISNEFNNPLID
CEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
LKTLQEFEAFAIEIKKSAELNFIDENEAKLAKTDFYCKIHDPKTTYVSLAYLETFLMRFI
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
NEMDELDITFLNSLLTNKLINGSTKLDILDLLATNNIDQNFNFYNKYLKQTKNVNPVNFN
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
NHYQEIDQIQNYLNKYLAKNPSLLHLANKLLMMYITYYFPFKFAHNHNLIAKTIIDYVKN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AMENHVCQYSEEQKAIVACINKILEEEQV
HHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVCIILKIKKGMLKIMNNNKSYIKKYFDDILIQAKQVLKKHDYAYAYDLISNEFNNPLID
CEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
LKTLQEFEAFAIEIKKSAELNFIDENEAKLAKTDFYCKIHDPKTTYVSLAYLETFLMRFI
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
NEMDELDITFLNSLLTNKLINGSTKLDILDLLATNNIDQNFNFYNKYLKQTKNVNPVNFN
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
NHYQEIDQIQNYLNKYLAKNPSLLHLANKLLMMYITYYFPFKFAHNHNLIAKTIIDYVKN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AMENHVCQYSEEQKAIVACINKILEEEQV
HHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA