Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357984

GI number: 13357984

Start: 486107

End: 486610

Strand: Direct

Name: Not Available

Synonym: UU422

Alternate gene names: NA

Gene position: 486107-486610 (Clockwise)

Preceding gene: 13357983

Following gene: 13357985

Centisome position: 64.67

GC content: 16.27

Gene sequence:

>504_bases
ATGAACATTAAAAAAATTAAACGTGAATTTAATACTCATTACGAATTGATTAAAAAAGAAATTAAAAACTTAAATGAATA
TAAAAAAGAATTAGAATTCTTAATTGCAACAATTTATTTTAATTCTAAAATGGTTTTTAAAGAAATATCATTAGATAGTT
GAAAAAAATTTAGCGATTATGTTTATCGATTTTTTTTAATAATTAATAAAAATAATCAATCACAAAATTTTGATTTAGAT
TGTTGATACTTAGAAATTAAAGAATTAATAAAAGTACTAAATATTAGTAATTTTTTATTGAATAAGCAATTGGAACAAAT
ATATTTGAAATACATAATTTTTTATTGGTATAACATTAATATTCCAATAAATTATGAAATTGATGATTTTAATATTATTT
GTTTACGCAATAAAGCATTTGTAGATTGTATGCAAATTTTACAAGAATATTATCATATTAATGTTGATATTTTAATTAAT
TTAGTTATCAAACAAATTAGATAA

Upstream 100 bases:

>100_bases
CAAATTACCGTTGTAGGTCCAACAAGAATGGATTATGCAAAAATCAAAGCTTTATTAGATTTTTTAAAAATTGAAATTGA
AAAAATTTTAGGATCAACAA

Downstream 100 bases:

>100_bases
AGGATAAACATATGCAAGAAAAAAAACAAACAAAGAATGAAAATTTTCAAGATCTAGATCAATTAAAAATTGGTGATGAA
CTAATGGTGCATGCTTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNIKKIKREFNTHYELIKKEIKNLNEYKKELEFLIATIYFNSKMVFKEISLDSWKKFSDYVYRFFLIINKNNQSQNFDLD
CWYLEIKELIKVLNISNFLLNKQLEQIYLKYIIFYWYNINIPINYEIDDFNIICLRNKAFVDCMQILQEYYHINVDILIN
LVIKQIR

Sequences:

>Translated_167_residues
MNIKKIKREFNTHYELIKKEIKNLNEYKKELEFLIATIYFNSKMVFKEISLDS*KKFSDYVYRFFLIINKNNQSQNFDLD
C*YLEIKELIKVLNISNFLLNKQLEQIYLKYIIFYWYNINIPINYEIDDFNIICLRNKAFVDCMQILQEYYHINVDILIN
LVIKQIR
>Mature_167_residues
MNIKKIKREFNTHYELIKKEIKNLNEYKKELEFLIATIYFNSKMVFKEISLDS*KKFSDYVYRFFLIINKNNQSQNFDLD
C*YLEIKELIKVLNISNFLLNKQLEQIYLKYIIFYWYNINIPINYEIDDFNIICLRNKAFVDCMQILQEYYHINVDILIN
LVIKQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20279; Mature: 20279

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKKIKREFNTHYELIKKEIKNLNEYKKELEFLIATIYFNSKMVFKEISLDSKKFSDYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHH
YRFFLIINKNNQSQNFDLDCYLEIKELIKVLNISNFLLNKQLEQIYLKYIIFYWYNINIP
HHEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEE
INYEIDDFNIICLRNKAFVDCMQILQEYYHINVDILINLVIKQIR
EEEEECCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKKIKREFNTHYELIKKEIKNLNEYKKELEFLIATIYFNSKMVFKEISLDSKKFSDYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHH
YRFFLIINKNNQSQNFDLDCYLEIKELIKVLNISNFLLNKQLEQIYLKYIIFYWYNINIP
HHEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEE
INYEIDDFNIICLRNKAFVDCMQILQEYYHINVDILINLVIKQIR
EEEEECCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA