Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357979

GI number: 13357979

Start: 481197

End: 482162

Strand: Reverse

Name: Not Available

Synonym: UU417

Alternate gene names: NA

Gene position: 482162-481197 (Counterclockwise)

Preceding gene: 13357980

Following gene: 13357978

Centisome position: 64.14

GC content: 24.53

Gene sequence:

>966_bases
ATGCAAAAAGATTTGTTAACAAAATTAATTGAACAAACATATGGTTTTAATAAAATCACTATTTTTGTTCATACAAATCC
TGATTGTGATGCTTTAGGTTCTGCTTTCGCATTAGCACGAATTTTAAAATTAAATACTTTTGGAACAAGAGTTAAAATTG
TTGGGGTTAACGCATTAAATCCTAATGATTTTAAAAATTTTTTTACATTTGATCCCAATGAAGTTGATGATGAATTTATT
AAAGATTCAATAGCTTTTATTGTTGATACAGCTAATCAAGAAAGAGTTTTATCACAAAAACATAGATTAGCAAAAAAAAC
AATTTTAGTTGATCATCATGTAAAAACAATAACTTATACTGATCTTGAATACATTAATGATCAATCAATTGCAGCTTGTG
AAATGATAGCATATTCATTAATGCATACTAATTTAAATTTTGATTTAAAAACTTTAAATTATCTTTTATTAGGTATTACT
ACTGATTCAAATCGTTTGATGTACGATAAAGTAAGTGATTTTACATATGAGATTATGTCTTGATTTTTTAAAAATAATGT
CAAACATTATCAAATTTATCAACAATTGTATGAACGTAATTTAAATGATATTTTATTTGATAATGAATTGGTTAAAACAA
TCAAAACACAAGGACAAGTTGCATACTTAAACATTGATCCGCAATGAAATCAAAAATATCATTTTACAAGATGAGGAGAT
AAAGTTTATTTATTAAGTAATATTAAAAATTATCCCATTTGATTCATCGTATATTTTGATGAAAATACAAATACTTATAA
AGTCTCATTACGAAGTAATAAGTACAAAGTACGTTTGGTTGCTAGTCAATTTAATGGAGGCGGACATGATTTGGCAGCAG
GTTGTAGTTTAACTAATATAGATCAATTAGAAAATTTATTAAGTGCTCTTGATGCACTAATTAAAAATAAAATAGTTGTT
GATTAA

Upstream 100 bases:

>100_bases
AATTAGAAGAAGAATCATTAGTTTTAGATGCAATTTATGAATTAGTTTACACTAAAGAAATCACTAAAATTAATTTATCA
TAAAATGGGAGAAAATTATT

Downstream 100 bases:

>100_bases
ATAAAAATATAAGCCATTACCTAATTTTATTTATAATATTAGGTAATAAATTAATAAAATTTTTATAAGGATGTGTAATA
AATTATGAGTGATAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQKDLLTKLIEQTYGFNKITIFVHTNPDCDALGSAFALARILKLNTFGTRVKIVGVNALNPNDFKNFFTFDPNEVDDEFI
KDSIAFIVDTANQERVLSQKHRLAKKTILVDHHVKTITYTDLEYINDQSIAACEMIAYSLMHTNLNFDLKTLNYLLLGIT
TDSNRLMYDKVSDFTYEIMSWFFKNNVKHYQIYQQLYERNLNDILFDNELVKTIKTQGQVAYLNIDPQWNQKYHFTRWGD
KVYLLSNIKNYPIWFIVYFDENTNTYKVSLRSNKYKVRLVASQFNGGGHDLAAGCSLTNIDQLENLLSALDALIKNKIVV
D

Sequences:

>Translated_321_residues
MQKDLLTKLIEQTYGFNKITIFVHTNPDCDALGSAFALARILKLNTFGTRVKIVGVNALNPNDFKNFFTFDPNEVDDEFI
KDSIAFIVDTANQERVLSQKHRLAKKTILVDHHVKTITYTDLEYINDQSIAACEMIAYSLMHTNLNFDLKTLNYLLLGIT
TDSNRLMYDKVSDFTYEIMS*FFKNNVKHYQIYQQLYERNLNDILFDNELVKTIKTQGQVAYLNIDPQ*NQKYHFTR*GD
KVYLLSNIKNYPI*FIVYFDENTNTYKVSLRSNKYKVRLVASQFNGGGHDLAAGCSLTNIDQLENLLSALDALIKNKIVV
D
>Mature_321_residues
MQKDLLTKLIEQTYGFNKITIFVHTNPDCDALGSAFALARILKLNTFGTRVKIVGVNALNPNDFKNFFTFDPNEVDDEFI
KDSIAFIVDTANQERVLSQKHRLAKKTILVDHHVKTITYTDLEYINDQSIAACEMIAYSLMHTNLNFDLKTLNYLLLGIT
TDSNRLMYDKVSDFTYEIMS*FFKNNVKHYQIYQQLYERNLNDILFDNELVKTIKTQGQVAYLNIDPQ*NQKYHFTR*GD
KVYLLSNIKNYPI*FIVYFDENTNTYKVSLRSNKYKVRLVASQFNGGGHDLAAGCSLTNIDQLENLLSALDALIKNKIVV
D

Specific function: Unknown

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mgp1/MG371 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 36455; Mature: 36455

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDLLTKLIEQTYGFNKITIFVHTNPDCDALGSAFALARILKLNTFGTRVKIVGVNALN
CCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
PNDFKNFFTFDPNEVDDEFIKDSIAFIVDTANQERVLSQKHRLAKKTILVDHHVKTITYT
CCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCEEEEEEE
DLEYINDQSIAACEMIAYSLMHTNLNFDLKTLNYLLLGITTDSNRLMYDKVSDFTYEIMS
CHHHCCCCCHHHHHHHHHHHHHCCCCEEHEEEEEEEEEEEECCCEEEEHHHHHHHHHHHH
FFKNNVKHYQIYQQLYERNLNDILFDNELVKTIKTQGQVAYLNIDPQNQKYHFTRGDKVY
HHHHCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEE
LLSNIKNYPIFIVYFDENTNTYKVSLRSNKYKVRLVASQFNGGGHDLAAGCSLTNIDQLE
EEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
NLLSALDALIKNKIVVD
HHHHHHHHHHHCCEECC
>Mature Secondary Structure
MQKDLLTKLIEQTYGFNKITIFVHTNPDCDALGSAFALARILKLNTFGTRVKIVGVNALN
CCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
PNDFKNFFTFDPNEVDDEFIKDSIAFIVDTANQERVLSQKHRLAKKTILVDHHVKTITYT
CCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCEEEEEEE
DLEYINDQSIAACEMIAYSLMHTNLNFDLKTLNYLLLGITTDSNRLMYDKVSDFTYEIMS
CHHHCCCCCHHHHHHHHHHHHHCCCCEEHEEEEEEEEEEEECCCEEEEHHHHHHHHHHHH
FFKNNVKHYQIYQQLYERNLNDILFDNELVKTIKTQGQVAYLNIDPQNQKYHFTRGDKVY
HHHHCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEE
LLSNIKNYPIFIVYFDENTNTYKVSLRSNKYKVRLVASQFNGGGHDLAAGCSLTNIDQLE
EEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
NLLSALDALIKNKIVVD
HHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]