| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357978
GI number: 13357978
Start: 480900
End: 481112
Strand: Reverse
Name: Not Available
Synonym: UU416
Alternate gene names: NA
Gene position: 481112-480900 (Counterclockwise)
Preceding gene: 13357979
Following gene: 13357977
Centisome position: 64.0
GC content: 23.47
Gene sequence:
>213_bases ATGAGTGATAAAAAAAGTGATTTTGAAAAGTTATTTGAGCGTTCAAAAGTACAAGAAACATCTATTTTCGATATTAATGA TATTGATGAACAAAAACCGTACGAAGAACATTCGATTGAAGAATTATCATATATCTTAGAATATGAAAAAATTGATAAGA AAACACGTGAAAAGATCAAAAAAATTATTAAAGAGAAACAACAAAATTTATAA
Upstream 100 bases:
>100_bases AATAGTTGTTGATTAAATAAAAATATAAGCCATTACCTAATTTTATTTATAATATTAGGTAATAAATTAATAAAATTTTT ATAAGGATGTGTAATAAATT
Downstream 100 bases:
>100_bases TGTTTATTAATTTAAATGTGCATTCACATTATTCTTTACTTAATAGTACTTTAAGTATTGATGATTTAATTAAATACGCA TTAGATAACAAACAACCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSDKKSDFEKLFERSKVQETSIFDINDIDEQKPYEEHSIEELSYILEYEKIDKKTREKIKKIIKEKQQNL
Sequences:
>Translated_70_residues MSDKKSDFEKLFERSKVQETSIFDINDIDEQKPYEEHSIEELSYILEYEKIDKKTREKIKKIIKEKQQNL >Mature_69_residues SDKKSDFEKLFERSKVQETSIFDINDIDEQKPYEEHSIEELSYILEYEKIDKKTREKIKKIIKEKQQNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.pneumoniae MPN377
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y416_UREPA (Q9PQ73)
Other databases:
- EMBL: AF222894 - RefSeq: NP_078252.1 - GeneID: 876229 - GenomeReviews: AF222894_GR - KEGG: uur:UU416 - HOGENOM: HBG263887 - OMA: YEQHSIE - ProtClustDB: CLSK2298924 - BioCyc: UURE95667:UU416-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8569; Mature: 8438
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKKSDFEKLFERSKVQETSIFDINDIDEQKPYEEHSIEELSYILEYEKIDKKTREKIK CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KIIKEKQQNL HHHHHHHHCC >Mature Secondary Structure SDKKSDFEKLFERSKVQETSIFDINDIDEQKPYEEHSIEELSYILEYEKIDKKTREKIK CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KIIKEKQQNL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724