Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357939

GI number: 13357939

Start: 436307

End: 436858

Strand: Reverse

Name: Not Available

Synonym: UU379

Alternate gene names: NA

Gene position: 436858-436307 (Counterclockwise)

Preceding gene: 13357940

Following gene: 13357936

Centisome position: 58.11

GC content: 21.01

Gene sequence:

>552_bases
ATGTCAAAAAACCCTTATGTAATTAATGAATGATTTATGGCTAACGTGATTCATAATATCAAAGAATTACAAACGTTAAC
CATTAACAAAAAAATTAAAATTAAAGATTTTGATTACTTATCTTATTTACCTTTGGTAAAAGATGATCCATTAGCTTCAT
ATTTTAAATCTATTTATGAACAAGAAGTAAAAAGAACTAAACTTGTTTTGGCTCACAATGATTTTTCAATTAATAACATT
TTAGCAAATGAATGCGAAAATCTTTTTATATTAATTGATTTTGAATATAGTAGTAGAAATTTAAAAGATTGAGATTTATT
TAATTTTTTAAGAGATCTCAATGATGTCCAATTAAATTTTGGAATTTCTTTTATAAAAGAAAAATTAGGATATGACGAAT
GCTTGATTTATAAATACTTATTTTTAACATCATATTATGGTTTTTTATGAGCTACAAACGCTTTTTTAAAAACTAATGAA
TTAAAAATTAAGATATATGGCGAAAATGCTTATCAAAAAGCTGATTTTTATTTACAAAAATTAAATAAATAA

Upstream 100 bases:

>100_bases
AAAAAGGGAAATACTTTAGAGCATTATTTGTTTACTAAATTTTTCAAAGGTTATTTTTATTATGATCAACAATCTCATCA
CCTAATTAGTCAAAAAATAA

Downstream 100 bases:

>100_bases
TAAAAAATCCATCTTTGTTATAAACATAATAAGACGGATTTTTTATTGTATTATAATCTTTATCTTTATTAATTAAAAAT
TAATGTAAATCTTTTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSKNPYVINEWFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNI
LANECENLFILIDFEYSSRNLKDWDLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFLWATNAFLKTNE
LKIKIYGENAYQKADFYLQKLNK

Sequences:

>Translated_183_residues
MSKNPYVINE*FMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNI
LANECENLFILIDFEYSSRNLKD*DLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFL*ATNAFLKTNE
LKIKIYGENAYQKADFYLQKLNK
>Mature_182_residues
SKNPYVINE*FMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNIL
ANECENLFILIDFEYSSRNLKD*DLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFL*ATNAFLKTNEL
KIKIYGENAYQKADFYLQKLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21293; Mature: 21162

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNPYVINEFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQ
CCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH
EVKRTKLVLAHNDFSINNILANECENLFILIDFEYSSRNLKDDLFNFLRDLNDVQLNFGI
HHHHHEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCH
SFIKEKLGYDECLIYKYLFLTSYYGFLATNAFLKTNELKIKIYGENAYQKADFYLQKLNK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SKNPYVINEFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQ
CCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH
EVKRTKLVLAHNDFSINNILANECENLFILIDFEYSSRNLKDDLFNFLRDLNDVQLNFGI
HHHHHEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCH
SFIKEKLGYDECLIYKYLFLTSYYGFLATNAFLKTNELKIKIYGENAYQKADFYLQKLNK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA