Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357921

GI number: 13357921

Start: 411137

End: 411661

Strand: Direct

Name: Not Available

Synonym: UU361

Alternate gene names: NA

Gene position: 411137-411661 (Clockwise)

Preceding gene: 13357920

Following gene: 13357928

Centisome position: 54.69

GC content: 23.43

Gene sequence:

>525_bases
ATGAAAAATAAGTATTTTAGAAAAAATAAATTTTGGTTATTAATACCAATAAGTTTTGTAAGTCTTGGAAGTATTACATT
AGTTGCTACTGCTTGTGTAAAGAAAAATTTTTATCCTAATACATTTGCAGATGATCAGATTTATATCACTAAGAATAATG
AAAAAACTGTTAAGTTTCGTATTAGTCGTAATGATGAAGAAAATAAAAAGTATTTTAAAGATGATCTTAAATGAAATACT
TTCATTAATAAACTTAAAAAAACTTATATTAATGTTGAAACTGTTATTCCAAAAGAAAACGCAAAACAAAATATTAAGCA
ACAAGATTTATGCATGCGCGCATTACCTGTACAAGTTTTAAGTAATAATAAATATGTTGATATTTACGTAAAGATTCCTG
TTTTATTAGCTAATACTAAAATGTTAGTTGTTGGTGATGATTTACTAAAATCATTTTATTTTGATACAGATAACTTAATA
ATGAATGCTAAACATTTTCAACCAATTCCTATCAAAATGCTTTAG

Upstream 100 bases:

>100_bases
CATTTTATTTATTATTTTTAGAGTTTATCTAAAAATTTAATTCTTACAAAAAGAATTAAAGTAGAATATATATTAGTTTT
ATAAAAATAAGGATTAATTA

Downstream 100 bases:

>100_bases
TTTGTTAATAAATAAAAACCTCTTTTTAAAGAAGGAGGTTTTTATTTATTAATGATTATTCCTTTGATTGTTGTCATTGA
TAAAATTGCATCAACAATAC

Product: membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKNKYFRKNKFWLLIPISFVSLGSITLVATACVKKNFYPNTFADDQIYITKNNEKTVKFRISRNDEENKKYFKDDLKWNT
FINKLKKTYINVETVIPKENAKQNIKQQDLCMRALPVQVLSNNKYVDIYVKIPVLLANTKMLVVGDDLLKSFYFDTDNLI
MNAKHFQPIPIKML

Sequences:

>Translated_174_residues
MKNKYFRKNKFWLLIPISFVSLGSITLVATACVKKNFYPNTFADDQIYITKNNEKTVKFRISRNDEENKKYFKDDLK*NT
FINKLKKTYINVETVIPKENAKQNIKQQDLCMRALPVQVLSNNKYVDIYVKIPVLLANTKMLVVGDDLLKSFYFDTDNLI
MNAKHFQPIPIKML
>Mature_174_residues
MKNKYFRKNKFWLLIPISFVSLGSITLVATACVKKNFYPNTFADDQIYITKNNEKTVKFRISRNDEENKKYFKDDLK*NT
FINKLKKTYINVETVIPKENAKQNIKQQDLCMRALPVQVLSNNKYVDIYVKIPVLLANTKMLVVGDDLLKSFYFDTDNLI
MNAKHFQPIPIKML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20295; Mature: 20295

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKYFRKNKFWLLIPISFVSLGSITLVATACVKKNFYPNTFADDQIYITKNNEKTVKFR
CCCCCEECCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEE
ISRNDEENKKYFKDDLKNTFINKLKKTYINVETVIPKENAKQNIKQQDLCMRALPVQVLS
EECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCHHHHHHHHCCHHEEC
NNKYVDIYVKIPVLLANTKMLVVGDDLLKSFYFDTDNLIMNAKHFQPIPIKML
CCCEEEEEEEEEEEEECCEEEEECHHHHHHHCCCCCCEEEECCCCCCCCEEEC
>Mature Secondary Structure
MKNKYFRKNKFWLLIPISFVSLGSITLVATACVKKNFYPNTFADDQIYITKNNEKTVKFR
CCCCCEECCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEE
ISRNDEENKKYFKDDLKNTFINKLKKTYINVETVIPKENAKQNIKQQDLCMRALPVQVLS
EECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCHHHHHHHHCCHHEEC
NNKYVDIYVKIPVLLANTKMLVVGDDLLKSFYFDTDNLIMNAKHFQPIPIKML
CCCEEEEEEEEEEEEECCEEEEECHHHHHHHCCCCCCEEEECCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA