Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699213

Identifier: 126699213

GI number: 126699213

Start: 1862040

End: 1863239

Strand: Direct

Name: 126699213

Synonym: CD1609

Alternate gene names: NA

Gene position: 1862040-1863239 (Clockwise)

Preceding gene: 126699212

Following gene: 126699214

Centisome position: 43.4

GC content: 22.75

Gene sequence:

>1200_bases
ATGAAATTAAAATCTAAAATATCTATATTTATTATATTTTTGACTTTAGCAATATATTTTAGTATAGGTTTATTAAATAA
TGAAGATAATTTAAAGATAAAAACTATAAAAGGTGACTCTAATGAATTAGACCATATAAACATAAATTTTGGATATGCTT
TGAATGGATATATAAATTCATATTATACAATAAATGGAAGCAACAAAACCAAAAAGACTGAATTAATAAAACTACAAAAG
GATAGTAAGAACACAAATAATTTAATTGATGTATCTAGTGGTTCAGATTTAATTGCTCATGTTGGATTTGAAATGAATGA
GGAGTCAAAAGATATAAACTTTGTGATAGATGAGAAAAAAGAAGATTTAGAAAAAGGTGTATTTCCATCAGAAGGTAGTG
ATAAAGAAATTGAATATGAAAAATTAGATATGAATAATTTTACAAGGACAAGATATAAAGTAGATAAAAGTACAGATGAT
TATTATGCAAAGATACTAGCATCAAAAAGATATAAAAAATACTTATATGTATCTGTACTTTATGCTACAAGTGATTCATC
AGAAAATAACAAAGAATATTCAAGTACTATAGATATAATAAAAATTAATCCAGAAAATAAAAAAATCAAGACTATAAAAA
GTATAAATTTAAGTAATTATTTTTCCGAAAAATACCAAAACATAGAGAACATAGGTGTAAGTTATGCTAGCAAATATGAG
GATAAGATGTATATTTTAGTAAATGTACTAAATACAAACATAGGTGATAATAGTAATTCTAAATTTCATTTACTTGAGTA
TAATCTTGAAGAAAATAAGGAAAGCATAATGGAATTAAAAACTGATAGCAAAATGGCTTTAGCAAAAGCAAAGTTAGAAG
CTAATAAATTATATATGGTAATGTCGAATGATTATGATAATAGTTCAATTACAGAGTTAAATTTACTTACCTATAATATA
TTAGATAAAAGCTTAGATGAAGATAAATATGTTTTAGATAATAGAGAAAAAAGAGGAATTAGAAGTATTGAAATTGATTC
AAATAAAATCGTTGCATATACATCAAGGCTAAACTCTATATTATCTTGGGATGATAAATTTATGCTATATATAATAAATA
AAAATTCTAAGGAAATTGTATATGAAGGAGAATTACAATTTAACAGTTCAAATAGTATGTTAGAATTTGAAATAAAGTAG

Upstream 100 bases:

>100_bases
TAGTAGCAGGGTTATTAAGTTTTTTAATTATAATGTTTATTCTAAATGGAATATCTTATTTGCTAATTAAAAAGAAAGTA
TCTCTTTAAGGAGGGGTGGT

Downstream 100 bases:

>100_bases
GTGAGTTGATGAAAGATTTAATAAGATTATTCGAATTTGAATTAAAAAGAAATATAAAGAATTATATATTTATAATAATT
TGTTGTTGTTCTTTTGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKLKSKISIFIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINSYYTINGSNKTKKTELIKLQK
DSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKKEDLEKGVFPSEGSDKEIEYEKLDMNNFTRTRYKVDKSTDD
YYAKILASKRYKKYLYVSVLYATSDSSENNKEYSSTIDIIKINPENKKIKTIKSINLSNYFSEKYQNIENIGVSYASKYE
DKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELKTDSKMALAKAKLEANKLYMVMSNDYDNSSITELNLLTYNI
LDKSLDEDKYVLDNREKRGIRSIEIDSNKIVAYTSRLNSILSWDDKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK

Sequences:

>Translated_399_residues
MKLKSKISIFIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINSYYTINGSNKTKKTELIKLQK
DSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKKEDLEKGVFPSEGSDKEIEYEKLDMNNFTRTRYKVDKSTDD
YYAKILASKRYKKYLYVSVLYATSDSSENNKEYSSTIDIIKINPENKKIKTIKSINLSNYFSEKYQNIENIGVSYASKYE
DKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELKTDSKMALAKAKLEANKLYMVMSNDYDNSSITELNLLTYNI
LDKSLDEDKYVLDNREKRGIRSIEIDSNKIVAYTSRLNSILSWDDKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK
>Mature_399_residues
MKLKSKISIFIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINSYYTINGSNKTKKTELIKLQK
DSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKKEDLEKGVFPSEGSDKEIEYEKLDMNNFTRTRYKVDKSTDD
YYAKILASKRYKKYLYVSVLYATSDSSENNKEYSSTIDIIKINPENKKIKTIKSINLSNYFSEKYQNIENIGVSYASKYE
DKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELKTDSKMALAKAKLEANKLYMVMSNDYDNSSITELNLLTYNI
LDKSLDEDKYVLDNREKRGIRSIEIDSNKIVAYTSRLNSILSWDDKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46203; Mature: 46203

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKSKISIFIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINS
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECEEEE
YYTINGSNKTKKTELIKLQKDSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKK
EEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCH
EDLEKGVFPSEGSDKEIEYEKLDMNNFTRTRYKVDKSTDDYYAKILASKRYKKYLYVSVL
HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEE
YATSDSSENNKEYSSTIDIIKINPENKKIKTIKSINLSNYFSEKYQNIENIGVSYASKYE
EEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHCCC
DKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELKTDSKMALAKAKLEANKLYMV
CEEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHEECCCCHHHHHHHEECCCEEEEE
MSNDYDNSSITELNLLTYNILDKSLDEDKYVLDNREKRGIRSIEIDSNKIVAYTSRLNSI
EECCCCCCCEEEEEEEEEEHHHCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHH
LSWDDKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK
HCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MKLKSKISIFIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINS
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECEEEE
YYTINGSNKTKKTELIKLQKDSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKK
EEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCH
EDLEKGVFPSEGSDKEIEYEKLDMNNFTRTRYKVDKSTDDYYAKILASKRYKKYLYVSVL
HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEE
YATSDSSENNKEYSSTIDIIKINPENKKIKTIKSINLSNYFSEKYQNIENIGVSYASKYE
EEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHCCC
DKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELKTDSKMALAKAKLEANKLYMV
CEEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHEECCCCHHHHHHHEECCCEEEEE
MSNDYDNSSITELNLLTYNILDKSLDEDKYVLDNREKRGIRSIEIDSNKIVAYTSRLNSI
EECCCCCCCEEEEEEEEEEHHHCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHH
LSWDDKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK
HCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA