Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698647
Identifier: 126698647
GI number: 126698647
Start: 1255606
End: 1256031
Strand: Direct
Name: 126698647
Synonym: CD1063
Alternate gene names: NA
Gene position: 1255606-1256031 (Clockwise)
Preceding gene: 126698645
Following gene: 126698648
Centisome position: 29.27
GC content: 25.35
Gene sequence:
>426_bases ATGAAATATGTAGGACTATTACTAACTTCAGTAGGAATGTTTTTACTTATAGCAGTAAATTTTTATTATAATTCAATAAC TTTAGATATGCAACGTATAGAGGATTATGTAATGGAGACCAATTTAATCCTTGAAGATGTAGCTGAAAAGGAGAGTTATG TATCTAATGAAAAAGAAGACTACATATCAAGGTTAATGCATGTAAAGAAAGGAATAGAAAATTCAAAAACATCCTTCTTG ATAGAAAGATATAAGGAGTACAAAATAAAATCAATAGAAAGTTTAATCTATACTATATCAGAGGAGAAAAAAGATTATCT GGATGAAGTTGATAGATACAATAAACTTGGTGAAAAAGAAATAAATAAACTAATCAATAAAAACTTTTTAGAAGTAACTT ATCTGTCTATTACTACATATATTTAA
Upstream 100 bases:
>100_bases GGAATCTATAAAAAATAATAAAATTTTATAAATGTAGTAATAAAGTATTATTTGATGAATAAACTTTATTGATAACAAAT ATAACTTAGGAGGAAATGCT
Downstream 100 bases:
>100_bases TTAAAGAGACAAAACTTAGTCTCTTAATGATTCAAGGAGGATTAGTTATGACAAAATTAGAAGACAATATGGAACGTTTC TTTGGAGGATGCGAAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI
Sequences:
>Translated_141_residues MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI >Mature_141_residues MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16762; Mature: 16762
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YISRLMHVKKGIENSKTSFLIERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH INKLINKNFLEVTYLSITTYI HHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YISRLMHVKKGIENSKTSFLIERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH INKLINKNFLEVTYLSITTYI HHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA