Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698647

Identifier: 126698647

GI number: 126698647

Start: 1255606

End: 1256031

Strand: Direct

Name: 126698647

Synonym: CD1063

Alternate gene names: NA

Gene position: 1255606-1256031 (Clockwise)

Preceding gene: 126698645

Following gene: 126698648

Centisome position: 29.27

GC content: 25.35

Gene sequence:

>426_bases
ATGAAATATGTAGGACTATTACTAACTTCAGTAGGAATGTTTTTACTTATAGCAGTAAATTTTTATTATAATTCAATAAC
TTTAGATATGCAACGTATAGAGGATTATGTAATGGAGACCAATTTAATCCTTGAAGATGTAGCTGAAAAGGAGAGTTATG
TATCTAATGAAAAAGAAGACTACATATCAAGGTTAATGCATGTAAAGAAAGGAATAGAAAATTCAAAAACATCCTTCTTG
ATAGAAAGATATAAGGAGTACAAAATAAAATCAATAGAAAGTTTAATCTATACTATATCAGAGGAGAAAAAAGATTATCT
GGATGAAGTTGATAGATACAATAAACTTGGTGAAAAAGAAATAAATAAACTAATCAATAAAAACTTTTTAGAAGTAACTT
ATCTGTCTATTACTACATATATTTAA

Upstream 100 bases:

>100_bases
GGAATCTATAAAAAATAATAAAATTTTATAAATGTAGTAATAAAGTATTATTTGATGAATAAACTTTATTGATAACAAAT
ATAACTTAGGAGGAAATGCT

Downstream 100 bases:

>100_bases
TTAAAGAGACAAAACTTAGTCTCTTAATGATTCAAGGAGGATTAGTTATGACAAAATTAGAAGACAATATGGAACGTTTC
TTTGGAGGATGCGAAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL
IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI

Sequences:

>Translated_141_residues
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL
IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI
>Mature_141_residues
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKKGIENSKTSFL
IERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16762; Mature: 16762

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YISRLMHVKKGIENSKTSFLIERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
INKLINKNFLEVTYLSITTYI
HHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YISRLMHVKKGIENSKTSFLIERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
INKLINKNFLEVTYLSITTYI
HHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA