Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698645

Identifier: 126698645

GI number: 126698645

Start: 1254050

End: 1255063

Strand: Direct

Name: 126698645

Synonym: CD1061

Alternate gene names: NA

Gene position: 1254050-1255063 (Clockwise)

Preceding gene: 126698644

Following gene: 126698647

Centisome position: 29.23

GC content: 26.53

Gene sequence:

>1014_bases
GTGATATATATGATAATACATAAATTTATAATACATGTTTTGGACAAAAATAGTGATGTTCCAATATTAAATGACTTTGA
AGGCAAAGTTAATCAAGAAGTAGATGGTTTTTTCCAGAAAGCTATAAAAAGAATTGCAAAAGATGAGGATTTAAGAAAAG
GTGTTTTTAAAGATTATAATGACAATTTAATTAAAAACTGTTGTGAACAAATAATATATGATGAAAGTACTTTTTTGAAA
AATTCTAAAGAAATTGCATCTTACTTGTTTGATGTTATGAAAATTAATGCTGCACTAGAATCTTGTGATTTGGCAATTTG
CTTATACACTATTAAAGATGAAAAGAGTGTAGCAATACTGAAATTAGATTATAAAAAGTTGTACACTCATTCAATTGAAT
TTGTGGATGATAAATTTAATATTCAAATGGTTTCAAATGAAATTGGTATCCCAGAGACTTTAAGACAAAAGCAAGGAGCT
TTGATTAGTCTAAGTGGTATAAATGATGAGTTTCATCTAAGGCTTTTAGATAAGGATGCTGAAAAAGAAGGGTCAGAATC
TAAGTTTGTAACAGAATTTTTAAATGCTAAAAAAATAGATGATGATAAGTACAAGACCAAGGTATTTAAAAATACAGCTG
AAAATTGGATAACCAATGCTCTTAGTAATGATATAAAGCAAGCTGAAGATGTAAGAAGTATATTAAATTATACACTGAAG
GAAAAACATGAAGTTGATATAAATGACTTTGTTGATAATTCAATTAAAGATGATGAGTTAAAGGATAGCTTTAAAGAGCA
TATGGAAGAAAAAGGTCTTGATGAAAGTTTTAGTATAGATAAAAAATGGGTTGAGAAAAAGCTTAAAAAAAGAAGTATAA
AAACGGATAATGGTTTTGACATAAAAGGGAATCTAACTGATTTTGAAGACCCAATGAAGTATACTGTAAAACAAAATCAA
GATGGAACTATAGATATAATAATAAAGAATGTTACATTTTATGAAGAAAAGTAA

Upstream 100 bases:

>100_bases
AAGTTAGAGTTTGAACAACCAAGAACAAAAGAAAAATTGAAATTTAAAGCAGATATACCAGAGGATATGAAAGAGTTAAT
ATCGAAATTAAGATAATGGG

Downstream 100 bases:

>100_bases
TTTATATACTTAGTATATAAATTAAATATAAGAGCGTGTATTTTATATATTGTAAATAAATGTAATCTAGTCTGTGCGAA
CTCTAATATAATTTATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK
NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA
LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK
EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ
DGTIDIIIKNVTFYEEK

Sequences:

>Translated_337_residues
MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK
NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA
LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK
EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ
DGTIDIIIKNVTFYEEK
>Mature_337_residues
MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK
NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA
LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK
EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ
DGTIDIIIKNVTFYEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39247; Mature: 39247

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYN
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
DNLIKNCCEQIIYDESTFLKNSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAIL
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEE
KLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGALISLSGINDEFHLRLLDKDA
EEHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCC
EKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFD
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
IKGNLTDFEDPMKYTVKQNQDGTIDIIIKNVTFYEEK
EECCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCC
>Mature Secondary Structure
MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYN
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
DNLIKNCCEQIIYDESTFLKNSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAIL
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEE
KLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGALISLSGINDEFHLRLLDKDA
EEHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCC
EKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFD
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
IKGNLTDFEDPMKYTVKQNQDGTIDIIIKNVTFYEEK
EECCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA