Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698645
Identifier: 126698645
GI number: 126698645
Start: 1254050
End: 1255063
Strand: Direct
Name: 126698645
Synonym: CD1061
Alternate gene names: NA
Gene position: 1254050-1255063 (Clockwise)
Preceding gene: 126698644
Following gene: 126698647
Centisome position: 29.23
GC content: 26.53
Gene sequence:
>1014_bases GTGATATATATGATAATACATAAATTTATAATACATGTTTTGGACAAAAATAGTGATGTTCCAATATTAAATGACTTTGA AGGCAAAGTTAATCAAGAAGTAGATGGTTTTTTCCAGAAAGCTATAAAAAGAATTGCAAAAGATGAGGATTTAAGAAAAG GTGTTTTTAAAGATTATAATGACAATTTAATTAAAAACTGTTGTGAACAAATAATATATGATGAAAGTACTTTTTTGAAA AATTCTAAAGAAATTGCATCTTACTTGTTTGATGTTATGAAAATTAATGCTGCACTAGAATCTTGTGATTTGGCAATTTG CTTATACACTATTAAAGATGAAAAGAGTGTAGCAATACTGAAATTAGATTATAAAAAGTTGTACACTCATTCAATTGAAT TTGTGGATGATAAATTTAATATTCAAATGGTTTCAAATGAAATTGGTATCCCAGAGACTTTAAGACAAAAGCAAGGAGCT TTGATTAGTCTAAGTGGTATAAATGATGAGTTTCATCTAAGGCTTTTAGATAAGGATGCTGAAAAAGAAGGGTCAGAATC TAAGTTTGTAACAGAATTTTTAAATGCTAAAAAAATAGATGATGATAAGTACAAGACCAAGGTATTTAAAAATACAGCTG AAAATTGGATAACCAATGCTCTTAGTAATGATATAAAGCAAGCTGAAGATGTAAGAAGTATATTAAATTATACACTGAAG GAAAAACATGAAGTTGATATAAATGACTTTGTTGATAATTCAATTAAAGATGATGAGTTAAAGGATAGCTTTAAAGAGCA TATGGAAGAAAAAGGTCTTGATGAAAGTTTTAGTATAGATAAAAAATGGGTTGAGAAAAAGCTTAAAAAAAGAAGTATAA AAACGGATAATGGTTTTGACATAAAAGGGAATCTAACTGATTTTGAAGACCCAATGAAGTATACTGTAAAACAAAATCAA GATGGAACTATAGATATAATAATAAAGAATGTTACATTTTATGAAGAAAAGTAA
Upstream 100 bases:
>100_bases AAGTTAGAGTTTGAACAACCAAGAACAAAAGAAAAATTGAAATTTAAAGCAGATATACCAGAGGATATGAAAGAGTTAAT ATCGAAATTAAGATAATGGG
Downstream 100 bases:
>100_bases TTTATATACTTAGTATATAAATTAAATATAAGAGCGTGTATTTTATATATTGTAAATAAATGTAATCTAGTCTGTGCGAA CTCTAATATAATTTATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ DGTIDIIIKNVTFYEEK
Sequences:
>Translated_337_residues MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ DGTIDIIIKNVTFYEEK >Mature_337_residues MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIYDESTFLK NSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGA LISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQ DGTIDIIIKNVTFYEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39247; Mature: 39247
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYN CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC DNLIKNCCEQIIYDESTFLKNSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAIL HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEE KLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGALISLSGINDEFHLRLLDKDA EEHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCC EKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFD CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE IKGNLTDFEDPMKYTVKQNQDGTIDIIIKNVTFYEEK EECCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure MIYMIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYN CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC DNLIKNCCEQIIYDESTFLKNSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAIL HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEE KLDYKKLYTHSIEFVDDKFNIQMVSNEIGIPETLRQKQGALISLSGINDEFHLRLLDKDA EEHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEEEEECCCC EKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTAENWITNALSNDIKQAEDVRSILNYTLK CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKWVEKKLKKRSIKTDNGFD CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE IKGNLTDFEDPMKYTVKQNQDGTIDIIIKNVTFYEEK EECCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA