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The map label for this gene is yjdI [H]

Identifier: 126698586

GI number: 126698586

Start: 1171483

End: 1171956

Strand: Direct

Name: yjdI [H]

Synonym: CD1002

Alternate gene names: 126698586

Gene position: 1171483-1171956 (Clockwise)

Preceding gene: 126698585

Following gene: 126698587

Centisome position: 27.31

GC content: 28.27

Gene sequence:

>474_bases
ATGGTTAAGACTAATGCTATGAGAATATTAGATTCAAATAAGATTGATTATAAAGTAATGTCTTATGAAGTGAAAAGTGA
ACATGTGGATGGTGTTGAGGTGGCACATGATATAGGAAGAGATGTAAATGAAGTGTATAAGACATTAGTAACTCAAGGAG
TTAGTAAGAATATATATGTATATGTAATACCAGTACATGAAAACTTAGACTTAAAAAAGGCTGCAAAAGTAGCTAAAGAG
AAAAGTGTAGAGATGATTCATGTAAAAGATATAAATAAGCTTACAGGTTATATTAGAGGCGGATGTTCTCCTATAGGTAT
GAAAAAGCTTTATAAAACTTTTGTAAATGAAAGTGCAAAGAATTTAGATACAATTATTGTGAGTGCAGGAAAAATAGGAT
ATCAAATAGAACTATCTCCATTTGATTTACAAAGACTTATAAAAGTAGAATTTGTAGATGTAATAAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAATATATTTGGTTAAAATCTATAAGACTATATTAAAATAGTACAGAATATTCAAAACTGTGTATAATGTTCGTATTT
TATAAAAAGGAAGTGAATGT

Downstream 100 bases:

>100_bases
GAATTACATATAAAATATAGAGCTTATATTCTCAATAATAGGTGTTGTAATATTAATAAAATGAATAAGAATTTTAAAAT
AAATATTCAGTTACTTATGT

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYVYVIPVHENLDLKKAAKVAKE
KSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAKNLDTIIVSAGKIGYQIELSPFDLQRLIKVEFVDVIKK

Sequences:

>Translated_157_residues
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYVYVIPVHENLDLKKAAKVAKE
KSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAKNLDTIIVSAGKIGYQIELSPFDLQRLIKVEFVDVIKK
>Mature_157_residues
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYVYVIPVHENLDLKKAAKVAKE
KSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAKNLDTIIVSAGKIGYQIELSPFDLQRLIKVEFVDVIKK

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=157, Percent_Identity=38.2165605095541, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17732; Mature: 17732

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYV
CCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE
YVIPVHENLDLKKAAKVAKEKSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAK
EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
NLDTIIVSAGKIGYQIELSPFDLQRLIKVEFVDVIKK
CCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYV
CCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE
YVIPVHENLDLKKAAKVAKEKSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAK
EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
NLDTIIVSAGKIGYQIELSPFDLQRLIKVEFVDVIKK
CCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]