Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698583

Identifier: 126698583

GI number: 126698583

Start: 1168922

End: 1169917

Strand: Direct

Name: 126698583

Synonym: CD0999

Alternate gene names: NA

Gene position: 1168922-1169917 (Clockwise)

Preceding gene: 126698582

Following gene: 126698584

Centisome position: 27.25

GC content: 30.52

Gene sequence:

>996_bases
ATGAAAAAGTATATTTCTATAATATTATTAGTGGTGTTGACTATGGTTGTTTTGGTAGGATGTTCACCAGGAAAAGATAA
CCCTAAAAATAAGGAGCTATCAGTTGTCAAACAAGTAAAAGTAGCTGTTCCAGATGGACTACCAGCAGTGGCAATAGCTA
AACTTGCAAATGAAAATCCAGAGATTAAAGAAGGATATGAAACAGTGTATAGCATTGAAAAGACACCTGAGGCGATTTCC
ACTAGAGTGATGAAAAAAGATGCAGATATAGCTATAGTTCCTTCAAACATGGCTGCAATAGCGTATAATAAAACTTCATC
ATATAATATTGTTGGAACTGTAGGAATGGGTTCACTTTATTTGGTGTCAACAGAAAATATAAAAGATTACTCTGATTTAG
TTGGTAAAGAAGTTGGATGTACTGGAAAAGGACTTACTCCAGACATAACTATAAAAAGTCTTTTGTTACAAAAGGATATA
AATTATTCAGATATAAAATTTAATTATGTAAGTTCAGCAAGTGAACTGGTACCATTATTGGCTACTGGTAAAGTTAAAAC
AGGTATTGTTCCAGAACCTGCACTTAGTGCTTTGATGTCTAAAAATCCAGACATAAAAATTATAAAAAGTTTAAATGACT
CATGGAAGGAAGTAAGTGGTTCAAAAGACGGTTATCCTCAATCTACTTTAATTGTAAAGTCTGAATTTTTAAGAGATAAT
AAAGATTTTGTTGATTCTTTTGTAGGTCAATTATCAAATAGTATAGATTGGGCAAACAAAAATCCTGAAGAATTAGGTGC
ATATTCTGAAAAAATAAAAATATCTACTGAATCAAAGATAATAGGAAAATCTCTTGAAAGAGCTAATTTGAAATATATTC
CAGTTAAGGACATGATTAAAGATTATAAAAATTACTATGAGAAATTAGCTAATTTTGATGATAAGACATTAGGAGGCAAA
GTACCAGATGAAGCAATATACTTTGTTGAGAAATAA

Upstream 100 bases:

>100_bases
AAATAAAAATACTTAAAAAAGAAGGATTATTCGATAAATTAACAGAAATTAGTATAAATAAATATAATTATTTTAATGAC
GTTACCTTTGGGAGGAAGAG

Downstream 100 bases:

>100_bases
AAAAAATAAAGAACAATTTATAGATAAAATGGAGGTAACACTTTCTTGTGTTATCCTCTTATTTTTATGGCAAATTATTG
CTTTAAAAATTGATAATGAT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENPEIKEGYETVYSIEKTPEAIS
TRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLYLVSTENIKDYSDLVGKEVGCTGKGLTPDITIKSLLLQKDI
NYSDIKFNYVSSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSGSKDGYPQSTLIVKSEFLRDN
KDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKIIGKSLERANLKYIPVKDMIKDYKNYYEKLANFDDKTLGGK
VPDEAIYFVEK

Sequences:

>Translated_331_residues
MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENPEIKEGYETVYSIEKTPEAIS
TRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLYLVSTENIKDYSDLVGKEVGCTGKGLTPDITIKSLLLQKDI
NYSDIKFNYVSSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSGSKDGYPQSTLIVKSEFLRDN
KDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKIIGKSLERANLKYIPVKDMIKDYKNYYEKLANFDDKTLGGK
VPDEAIYFVEK
>Mature_331_residues
MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENPEIKEGYETVYSIEKTPEAIS
TRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLYLVSTENIKDYSDLVGKEVGCTGKGLTPDITIKSLLLQKDI
NYSDIKFNYVSSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSGSKDGYPQSTLIVKSEFLRDN
KDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKIIGKSLERANLKYIPVKDMIKDYKNYYEKLANFDDKTLGGK
VPDEAIYFVEK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36298; Mature: 36298

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENP
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
EIKEGYETVYSIEKTPEAISTRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLY
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCEEE
LVSTENIKDYSDLVGKEVGCTGKGLTPDITIKSLLLQKDINYSDIKFNYVSSASELVPLL
EEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
ATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSGSKDGYPQSTLIVKSEFLRDN
CCCCCCCCCCCCHHHHHHHHCCCCEEEEHHCCHHHHHHCCCCCCCCCCEEEEEHHHHCCC
KDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKIIGKSLERANLKYIPVKDMIK
HHHHHHHHHHHHCCCCCCCCCHHHHCCHHHEEEECCHHHHHHHHHHHCCCEEECHHHHHH
DYKNYYEKLANFDDKTLGGKVPDEAIYFVEK
HHHHHHHHHCCCCCCCCCCCCCCHHEEEEEC
>Mature Secondary Structure
MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENP
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
EIKEGYETVYSIEKTPEAISTRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLY
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCEEE
LVSTENIKDYSDLVGKEVGCTGKGLTPDITIKSLLLQKDINYSDIKFNYVSSASELVPLL
EEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
ATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVSGSKDGYPQSTLIVKSEFLRDN
CCCCCCCCCCCCHHHHHHHHCCCCEEEEHHCCHHHHHHCCCCCCCCCCEEEEEHHHHCCC
KDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKIIGKSLERANLKYIPVKDMIK
HHHHHHHHHHHHCCCCCCCCCHHHHCCHHHEEEECCHHHHHHHHHHHCCCEEECHHHHHH
DYKNYYEKLANFDDKTLGGKVPDEAIYFVEK
HHHHHHHHHCCCCCCCCCCCCCCHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA