Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698577
Identifier: 126698577
GI number: 126698577
Start: 1157903
End: 1158418
Strand: Direct
Name: 126698577
Synonym: CD0993
Alternate gene names: NA
Gene position: 1157903-1158418 (Clockwise)
Preceding gene: 126698576
Following gene: 126698578
Centisome position: 26.99
GC content: 32.36
Gene sequence:
>516_bases ATGGATTTTTTGGCAAAGTATAAAGTTTTGAAGAAGCAAAATAGTAGTAAATCTTGTTTAGTTTGTGGAACACAAAATGA GCTAGGACTTAAAGCAGATTTTTATGAACTTGAAAATGGAGAGCTTGTATCAATTTGTAATACAAAGGATTGGCATCAAA GTTATCCTGGGAGAGTTCATGGAGGTATGTCTGCTGCAATATTGGATGAGACTATTGGAAGAGCTGTAAGTATAAATGAT GACCAAATATGGGGAGTAACAGTATCTTTAGAGTTGAAATATAAGAAACCAGTACCAACAGATGCTACTATAAAAGTTGT TGGAAGAATAACTAAAGAAAACAGAAAATTATTTGAAGGTACAGGAGAAATAATTCTACCAAATGGAGATATAGCAGTGA CAGCAACTGGAAAGTATATGAAAATGCCTATTGGACAAATTGCAGAAGGTGATTTTTCTAATGAAGAATGGTTTTTTGAA GAATCGAAAGAAAAAGTGGAATATATTGAACTTTGA
Upstream 100 bases:
>100_bases GCCTATTTTTATTATTAGAAGTTTGCAGGGATTTTATTAATATTATATAATATATTTTAGAATTATTTAATATTAAGCGA CTACTAATGTCGGTTAGGAG
Downstream 100 bases:
>100_bases TTAAATAAAAATTTTACATTTTAAAACATAAATTTTATATTTAGAAAAAATAAAATTCAAAAATACAATAAAAATACAAG ATAAAAATAAATTAGTTATA
Product: thioesterase
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVHGGMSAAILDETIGRAVSIND DQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEGTGEIILPNGDIAVTATGKYMKMPIGQIAEGDFSNEEWFFE ESKEKVEYIEL
Sequences:
>Translated_171_residues MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVHGGMSAAILDETIGRAVSIND DQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEGTGEIILPNGDIAVTATGKYMKMPIGQIAEGDFSNEEWFFE ESKEKVEYIEL >Mature_171_residues MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVHGGMSAAILDETIGRAVSIND DQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEGTGEIILPNGDIAVTATGKYMKMPIGQIAEGDFSNEEWFFE ESKEKVEYIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19130; Mature: 19130
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVH CCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHCCCCEEC GGMSAAILDETIGRAVSINDDQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEG CCCHHHHHHHHCCCEEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECC TGEIILPNGDIAVTATGKYMKMPIGQIAEGDFSNEEWFFEESKEKVEYIEL CCCEEEECCCEEEEECCCEEECCCCCCCCCCCCCCCEEECCCCCCEEEECC >Mature Secondary Structure MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVH CCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHCCCCEEC GGMSAAILDETIGRAVSINDDQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEG CCCHHHHHHHHCCCEEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECC TGEIILPNGDIAVTATGKYMKMPIGQIAEGDFSNEEWFFEESKEKVEYIEL CCCEEEECCCEEEEECCCEEECCCCCCCCCCCCCCCEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA