Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is msrAB [H]
Identifier: 126696857
GI number: 126696857
Start: 1286194
End: 1286796
Strand: Reverse
Name: msrAB [H]
Synonym: P9301_15191
Alternate gene names: 126696857
Gene position: 1286796-1286194 (Counterclockwise)
Preceding gene: 126696858
Following gene: 126696854
Centisome position: 78.37
GC content: 34.99
Gene sequence:
>603_bases ATGAAATATTTTTTACCTCTCATAATTGCTCTTTCAATATTTATCCACCCTGTAAATGCTTTTGCAGAGGAATTGATTCT TGCAGGAGGTTGTTTTTGGTGTTTAGAACATGATTTAGAGTCATTAAAGGGCATAAATTTTGTAAAAAGTGGATATTCAG GTGGAGATTTACAAAATCCTACCTATGAAAATCATGAAGGACATCAAGAAGTGGTTTTGGTGGACTATGATCCCCAATTG GTAATTTTACCAAAGATACTTAGGCTCTATTTCAGAAATATTGATCCTTTGGACAGCAAGGGTCAATTTTGTGATCGTGG AGATTCTTATAGGCCAGTGATCTTTTTCAAAGATGCAACTGAGGAAAGTGATGCAAAAAATGCTATCGTTGCGGCCTCTA ATGAGTTGCGAGTGCCATTAGAAAAATTATCCGTAGAACTAAAATCAAAAAGTCAATTTTGGTTGGCTGAAGAATATCAT CAGGATTTCGCTGAGAAAAATGAACTAAAGTATAAGTTTTATAGATTCTCTTGTGGGAGAGATCAGAGGTTGGATAAATT GTGGGGTGATAACGCTAGATCAACAAATCTTTGGAATGAATAA
Upstream 100 bases:
>100_bases GGTTATGCTTTTTTAAAAAAAGAATTGGGAGAAAATGGCGTAGTCCAAAGAGCTGCTAAAGAGATTATTAATTCTATTAT TTGAACTTTATAATAAAAAA
Downstream 100 bases:
>100_bases TTTTAAATTTAGTTATTTATTTTTAATCCATTGAACAAGAGTTTTAACTCCAAAACCGGTTGCACCTGATGGATTAATCC CCTTATTCTTATCAGTCCAA
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase; Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase [H]
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKYFLPLIIALSIFIHPVNAFAEELILAGGCFWCLEHDLESLKGINFVKSGYSGGDLQNPTYENHEGHQEVVLVDYDPQL VILPKILRLYFRNIDPLDSKGQFCDRGDSYRPVIFFKDATEESDAKNAIVAASNELRVPLEKLSVELKSKSQFWLAEEYH QDFAEKNELKYKFYRFSCGRDQRLDKLWGDNARSTNLWNE
Sequences:
>Translated_200_residues MKYFLPLIIALSIFIHPVNAFAEELILAGGCFWCLEHDLESLKGINFVKSGYSGGDLQNPTYENHEGHQEVVLVDYDPQL VILPKILRLYFRNIDPLDSKGQFCDRGDSYRPVIFFKDATEESDAKNAIVAASNELRVPLEKLSVELKSKSQFWLAEEYH QDFAEKNELKYKFYRFSCGRDQRLDKLWGDNARSTNLWNE >Mature_200_residues MKYFLPLIIALSIFIHPVNAFAEELILAGGCFWCLEHDLESLKGINFVKSGYSGGDLQNPTYENHEGHQEVVLVDYDPQL VILPKILRLYFRNIDPLDSKGQFCDRGDSYRPVIFFKDATEESDAKNAIVAASNELRVPLEKLSVELKSKSQFWLAEEYH QDFAEKNELKYKFYRFSCGRDQRLDKLWGDNARSTNLWNE
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrB Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=165, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI6912516, Length=165, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1790665, Length=158, Percent_Identity=31.6455696202532, Blast_Score=82, Evalue=3e-17, Organism=Drosophila melanogaster, GI24664627, Length=149, Percent_Identity=30.2013422818792, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI45553131, Length=134, Percent_Identity=31.3432835820896, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24664631, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.11; =1.8.4.12 [H]
Molecular weight: Translated: 23177; Mature: 23177
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFLPLIIALSIFIHPVNAFAEELILAGGCFWCLEHDLESLKGINFVKSGYSGGDLQNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC TYENHEGHQEVVLVDYDPQLVILPKILRLYFRNIDPLDSKGQFCDRGDSYRPVIFFKDAT CCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCC EESDAKNAIVAASNELRVPLEKLSVELKSKSQFWLAEEYHQDFAEKNELKYKFYRFSCGR CCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC DQRLDKLWGDNARSTNLWNE CHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKYFLPLIIALSIFIHPVNAFAEELILAGGCFWCLEHDLESLKGINFVKSGYSGGDLQNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC TYENHEGHQEVVLVDYDPQLVILPKILRLYFRNIDPLDSKGQFCDRGDSYRPVIFFKDAT CCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCC EESDAKNAIVAASNELRVPLEKLSVELKSKSQFWLAEEYHQDFAEKNELKYKFYRFSCGR CCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC DQRLDKLWGDNARSTNLWNE CHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]