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The map label for this gene is yrbE [C]

Identifier: 126696848

GI number: 126696848

Start: 1278812

End: 1279567

Strand: Direct

Name: yrbE [C]

Synonym: P9301_15101

Alternate gene names: 126696848

Gene position: 1278812-1279567 (Clockwise)

Preceding gene: 126696847

Following gene: 126696849

Centisome position: 77.89

GC content: 36.9

Gene sequence:

>756_bases
ATGTATTCCCATAATTTTTTCAAAAGACTTCTAAGCAGCTTAATCATTGGCGGGCAAGCAATTAATTTTATCTTTAAGGG
TAAAATTTCCAAAAATGATCTCTTTGACCAACTTATGGAGTCAGGCCCTGGCAGTTTATTAATTGTATTAATTACAGGAA
TTGCAGCAGGTACAGTTTTTAATATTCAAGTTGCATCACAACTCACAAGCATGGGGGTTTCAAGTGAAATTGGAGGTTTA
TTAGCTGTAGGCATGGCGAGAGAAATGGCTCCTCTTCTAACTGCTACTTTAATGACTGGAAAGGTTGCAACTGCATATGC
TGCTCAATTGGGTACCATGAAAGTCACAGAACAAATTGAGGCAATAACAATGTTAAGGACCGAACCAGTCCAATATTTGG
TGGTCCCAAGATTACTATCAATGGTAATAATGTCTCCAATACAGTGTCTTCTGTTTTTATCTGTAGCTTTATGGAGCGGA
CAGATTTGGAGCACAATTTTTTATAAAGTTCCTCCAATTGTTTTTTGGACATCTGTAAGATCAGGTAATGTGAGCTTAAC
CAGCACTGACTTAACTTCAATGTTAATAAAATCTGTAGTGTTCGGACTACTTATTGCAATCATTGCTTGTGGATACGGAC
TTACGACTAAAGGAGGTCCAAAAGAAGTTGGAACAAGTACAACAGGGGCAGTTGTAATGACTCTCGTTACTGTATCTTTA
ATGGATGTATTTCTAACACAAATTTTATTTGGATGA

Upstream 100 bases:

>100_bases
TAGATTATGTATTGGTTTTATACCCTCAATATTGGTAATAATTGGTCTTTTAATCATGAGAAAATGGGATCGAAAATTAA
TTACAAACTAATATAAAGAT

Downstream 100 bases:

>100_bases
TCCTATGTTTAACACTAAATCAAAAAAAGAGGAACCAGTAATAATATCTCCATCATTTCAGTTGCCAATCATTCTAATAG
TTTTAAGTTTTATGCTTTTG

Product: putative transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MYSHNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGL
LAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSG
QIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSL
MDVFLTQILFG

Sequences:

>Translated_251_residues
MYSHNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGL
LAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSG
QIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSL
MDVFLTQILFG
>Mature_251_residues
MYSHNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGL
LAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSG
QIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSL
MDVFLTQILFG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=218, Percent_Identity=29.3577981651376, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26816; Mature: 26816

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSHNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVF
CCCHHHHHHHHHHHHHCCHHEEHEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCEE
NIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIE
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHH
AITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCC
SGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSL
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH
MDVFLTQILFG
HHHHHHHHHCC
>Mature Secondary Structure
MYSHNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVF
CCCHHHHHHHHHHHHHCCHHEEHEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCEE
NIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIE
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHH
AITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCC
SGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSL
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH
MDVFLTQILFG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]