Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is ilvC
Identifier: 126696839
GI number: 126696839
Start: 1270777
End: 1271766
Strand: Direct
Name: ilvC
Synonym: P9301_15011
Alternate gene names: 126696839
Gene position: 1270777-1271766 (Clockwise)
Preceding gene: 126696838
Following gene: 126696840
Centisome position: 77.4
GC content: 37.58
Gene sequence:
>990_bases ATGACCCAACTCTTTTACGACACAGATGCAGATCTAAGTCTTTTAAATAATAAAACAATAGCGATTATTGGATATGGATC ACAAGGTCATGCACATGCCCTAAATCTTAAAGATAGCGGTATGGATGTAATTGTTGGATTATATAAAGGAAGTAAGTCTG AAAGCAAAGCTATTAGCGATGGTCTAAAAGTATTTAGCGTTTCTGAAGCTTGCGAAAAAGCAGACTGGATTATGATTCTC CTCCCCGATGAGTTTCAGAAAGACGTTTACCTTAAAGAAATAGAACCAAACTTAAAAGAAGGAAAGATACTAAGTTTTGC TCATGGCTTCAATATAAGATTCGGACTAATCAAGCCTCCTAGTTTTGTGGATGTTGTAATGATTGCCCCAAAAGGACCTG GACACACTGTTCGTTGGGAATATCAGAATGGTCAAGGAGTTCCAGCACTGTTTGCAGTTGAGCAGGATTCTTCCGGAAGT GCAAGATCATTGGCAATGGCTTACGCTAAAGGGATTGGCGGAACGAGAGCTGGGATTCTTGAAACAAACTTTAAAGAAGA AACAGAAACTGATTTATTTGGCGAACAAGCGGTTTTGTGCGGAGGATTATCAGAACTGGTTAAATCAGGATTCGAAACTC TTGTTGAGGCAGGTTATCAACCCGAACTTGCTTACTTCGAATGCTTACATGAAGTTAAACTTATTGTTGATTTAATGGTG AAGGGAGGCTTATCTCAAATGAGAGATTCCATTTCAAATACTGCAGAATATGGAGATTATGTAAGTGGTAAAAGACTTAT CAATAGTGATACAAAGAAAGAAATGCAGAAAATCCTAAAAGATATTCAAGATGGAACTTTCGCTAAGAATTTTGTCGAAG AATGCGATAAGGACAAACCATTAATGACAAAATTAAGAGAGGAGAACTCAAAACATGAAATTGAGAAAGTGGGTAAAAGT CTGCGCTCGATGTTCAGTTGGCTGAAATAA
Upstream 100 bases:
>100_bases TAATATTTTAATTTTAATTTTTTAAATTAATAATTTTTTTGGTTTATTGCCACCTTAATGTCTAAAATATTAATTATCAA ATGCAAAGAAGCTACAACTA
Downstream 100 bases:
>100_bases ATTTATTTTTAATATTCCTTGGATCGATTGGTTTTGATTTTTTAATCGGCGATCCAAGATTTTTAATCCACCCAGTTCAA GTAATTGGCTTTTACATAAA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTQLFYDTDADLSLLNNKTIAIIGYGSQGHAHALNLKDSGMDVIVGLYKGSKSESKAISDGLKVFSVSEACEKADWIMIL LPDEFQKDVYLKEIEPNLKEGKILSFAHGFNIRFGLIKPPSFVDVVMIAPKGPGHTVRWEYQNGQGVPALFAVEQDSSGS ARSLAMAYAKGIGGTRAGILETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVEAGYQPELAYFECLHEVKLIVDLMV KGGLSQMRDSISNTAEYGDYVSGKRLINSDTKKEMQKILKDIQDGTFAKNFVEECDKDKPLMTKLREENSKHEIEKVGKS LRSMFSWLK
Sequences:
>Translated_329_residues MTQLFYDTDADLSLLNNKTIAIIGYGSQGHAHALNLKDSGMDVIVGLYKGSKSESKAISDGLKVFSVSEACEKADWIMIL LPDEFQKDVYLKEIEPNLKEGKILSFAHGFNIRFGLIKPPSFVDVVMIAPKGPGHTVRWEYQNGQGVPALFAVEQDSSGS ARSLAMAYAKGIGGTRAGILETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVEAGYQPELAYFECLHEVKLIVDLMV KGGLSQMRDSISNTAEYGDYVSGKRLINSDTKKEMQKILKDIQDGTFAKNFVEECDKDKPLMTKLREENSKHEIEKVGKS LRSMFSWLK >Mature_328_residues TQLFYDTDADLSLLNNKTIAIIGYGSQGHAHALNLKDSGMDVIVGLYKGSKSESKAISDGLKVFSVSEACEKADWIMILL PDEFQKDVYLKEIEPNLKEGKILSFAHGFNIRFGLIKPPSFVDVVMIAPKGPGHTVRWEYQNGQGVPALFAVEQDSSGSA RSLAMAYAKGIGGTRAGILETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVEAGYQPELAYFECLHEVKLIVDLMVK GGLSQMRDSISNTAEYGDYVSGKRLINSDTKKEMQKILKDIQDGTFAKNFVEECDKDKPLMTKLREENSKHEIEKVGKSL RSMFSWLK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=312, Percent_Identity=36.5384615384615, Blast_Score=165, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323387, Length=324, Percent_Identity=33.9506172839506, Blast_Score=152, Evalue=6e-38,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_PROM0 (A3PEE9)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091725.1 - ProteinModelPortal: A3PEE9 - SMR: A3PEE9 - STRING: A3PEE9 - GeneID: 4912838 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_15011 - eggNOG: COG0059 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - BioCyc: PMAR167546:P9301ORF_1528-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36405; Mature: 36274
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLFYDTDADLSLLNNKTIAIIGYGSQGHAHALNLKDSGMDVIVGLYKGSKSESKAISD CCEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHH GLKVFSVSEACEKADWIMILLPDEFQKDVYLKEIEPNLKEGKILSFAHGFNIRFGLIKPP HHHHEEHHHHHHCCCEEEEEECCCCCCCEEHHHCCCCCCCCCEEEEECCCEEEEEEECCC SFVDVVMIAPKGPGHTVRWEYQNGQGVPALFAVEQDSSGSARSLAMAYAKGIGGTRAGIL CCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVEAGYQPELAYFECLHEVKLIVDLMV ECCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KGGLSQMRDSISNTAEYGDYVSGKRLINSDTKKEMQKILKDIQDGTFAKNFVEECDKDKP HCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH LMTKLREENSKHEIEKVGKSLRSMFSWLK HHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQLFYDTDADLSLLNNKTIAIIGYGSQGHAHALNLKDSGMDVIVGLYKGSKSESKAISD CEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHH GLKVFSVSEACEKADWIMILLPDEFQKDVYLKEIEPNLKEGKILSFAHGFNIRFGLIKPP HHHHEEHHHHHHCCCEEEEEECCCCCCCEEHHHCCCCCCCCCEEEEECCCEEEEEEECCC SFVDVVMIAPKGPGHTVRWEYQNGQGVPALFAVEQDSSGSARSLAMAYAKGIGGTRAGIL CCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVEAGYQPELAYFECLHEVKLIVDLMV ECCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KGGLSQMRDSISNTAEYGDYVSGKRLINSDTKKEMQKILKDIQDGTFAKNFVEECDKDKP HCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH LMTKLREENSKHEIEKVGKSLRSMFSWLK HHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA