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The map label for this gene is codA [H]

Identifier: 126696828

GI number: 126696828

Start: 1259549

End: 1260784

Strand: Reverse

Name: codA [H]

Synonym: P9301_14901

Alternate gene names: 126696828

Gene position: 1260784-1259549 (Counterclockwise)

Preceding gene: 126696835

Following gene: 126696827

Centisome position: 76.79

GC content: 32.04

Gene sequence:

>1236_bases
TTGAGTAATTCCGGCACAGCTGAGGTTCTTATTCCCAGAAGTCTTTTTGTAATAGAAGATATAGATAACCTCATTATCGA
TGTAGAGGATTTATGTTCAGTTTCAATTAGTTGGGAGGATGGATTTGTTTCTGAGTTAAAGCCTTTAAAAAATAAAATTA
CAAAACCAAAAAATATTTTATTCCCAAGATTTGTTGAACCGCATTCGCATTTTGATAAATCATTTACATGGGCAGCCTTT
CCTAATCTGGAATCAAACTATGGAGGAGCATTATCAGCAAATCTTCAAGAACATAAAACTAGAAGTACAGATAAGGTTCT
TGAAAGAGTTGATAAATCATTAAAACTTGCCATACAAAATGGATACCGAGCAATAAGAAGTCATATTGATACATACAAAG
GTCAATCTATTGATATTTGGAGTGAACTTTTTAAATTACAAAAAAAATTTTCATCTGAGTTGACTTTACAATACGTTGCT
TTAGCTCCATTGGAATTTTGGAATACAACTGATGGAGAAGATTTGGCAAAAATGTTTTCTTCTAATGGAGGCATTTTAGG
GGGTGTTGTTGTACCCCCTTTCAATAAAAAAGACACAAGCAAATTTCTAGCAAAGATGCTTCTTCTTGCGAGTAAAAATA
AATTAGAAATTGATTTGCATATAGATGAATCAATTATTGAACCTGGAGCTGGAATAAAAGTTTTATTAGAAACAATCGAA
AATTTAAATATTAATAGTATTCCGATCACTTGTAGCCATTTGAGTAGTCTTATTTCTCTAACTAATAGAGAGATTTTAAA
GTTAGGGGAGAAAATGGCTGAGAGAAATATTAAAGTTATTGCCTTACCACTAACAAATTTTTGGCTGCTCAATCGAAGTA
ATAAAACTACTTCATTAAAAAGACCAGTTGCGCCAATAAAGCAATTACAAAATTCACATGTTGATGTATCTCTTGGTAGT
GATAATGTGCAAGACCCTTGGTACCCATTTGGTGATTTTGACCCTTTTTATACGTTGTCTTGCTCGATGCCTATGCTTCA
ACTAAATCCCTGGGAGAGAATGACTCTATCTTCTATTTTTTTAGCTCCAAGCAGATTATTAAATTTAAAATGGGATGGTT
TAATTAAAAAAGGTTGTCCTGCTGATTTTGTGATTTTAGATGCACAAAGATGGGCAGATGTTTTTTCGAGAAATTTAAAG
AGAAAAGTATTTATAAACGGCGATTTATATTGTTAA

Upstream 100 bases:

>100_bases
AATTTTTCATAGTTATTTTTATCTTTTAGAGAAATTTGAATTATTTTCTAATTCGGTAAAATTTTCTTATGATTTAAAAT
AAAAGAAAACTTAAAAAAAC

Downstream 100 bases:

>100_bases
TTGGCTAATTTATATACAAACCATAAAAATTTTTATTAATGATATCAATATCAAAACTCAAATTTATAGACAAATTTAGA
GAAGTCGAAAACTTAGAGAT

Product: putative cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSNSGTAEVLIPRSLFVIEDIDNLIIDVEDLCSVSISWEDGFVSELKPLKNKITKPKNILFPRFVEPHSHFDKSFTWAAF
PNLESNYGGALSANLQEHKTRSTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWSELFKLQKKFSSELTLQYVA
LAPLEFWNTTDGEDLAKMFSSNGGILGGVVVPPFNKKDTSKFLAKMLLLASKNKLEIDLHIDESIIEPGAGIKVLLETIE
NLNINSIPITCSHLSSLISLTNREILKLGEKMAERNIKVIALPLTNFWLLNRSNKTTSLKRPVAPIKQLQNSHVDVSLGS
DNVQDPWYPFGDFDPFYTLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSRNLK
RKVFINGDLYC

Sequences:

>Translated_411_residues
MSNSGTAEVLIPRSLFVIEDIDNLIIDVEDLCSVSISWEDGFVSELKPLKNKITKPKNILFPRFVEPHSHFDKSFTWAAF
PNLESNYGGALSANLQEHKTRSTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWSELFKLQKKFSSELTLQYVA
LAPLEFWNTTDGEDLAKMFSSNGGILGGVVVPPFNKKDTSKFLAKMLLLASKNKLEIDLHIDESIIEPGAGIKVLLETIE
NLNINSIPITCSHLSSLISLTNREILKLGEKMAERNIKVIALPLTNFWLLNRSNKTTSLKRPVAPIKQLQNSHVDVSLGS
DNVQDPWYPFGDFDPFYTLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSRNLK
RKVFINGDLYC
>Mature_410_residues
SNSGTAEVLIPRSLFVIEDIDNLIIDVEDLCSVSISWEDGFVSELKPLKNKITKPKNILFPRFVEPHSHFDKSFTWAAFP
NLESNYGGALSANLQEHKTRSTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWSELFKLQKKFSSELTLQYVAL
APLEFWNTTDGEDLAKMFSSNGGILGGVVVPPFNKKDTSKFLAKMLLLASKNKLEIDLHIDESIIEPGAGIKVLLETIEN
LNINSIPITCSHLSSLISLTNREILKLGEKMAERNIKVIALPLTNFWLLNRSNKTTSLKRPVAPIKQLQNSHVDVSLGSD
NVQDPWYPFGDFDPFYTLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSRNLKR
KVFINGDLYC

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=387, Percent_Identity=25.0645994832041, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1786517, Length=363, Percent_Identity=23.4159779614325, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46434; Mature: 46303

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSGTAEVLIPRSLFVIEDIDNLIIDVEDLCSVSISWEDGFVSELKPLKNKITKPKNIL
CCCCCCEEEEECCCEEEEECHHHHEEEHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCC
FPRFVEPHSHFDKSFTWAAFPNLESNYGGALSANLQEHKTRSTDKVLERVDKSLKLAIQN
CCCCCCCHHHCCCCCEEEECCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTYKGQSIDIWSELFKLQKKFSSELTLQYVALAPLEFWNTTDGEDLAKMFS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCHHHHHHHHH
SNGGILGGVVVPPFNKKDTSKFLAKMLLLASKNKLEIDLHIDESIIEPGAGIKVLLETIE
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCHHHHHHHHH
NLNINSIPITCSHLSSLISLTNREILKLGEKMAERNIKVIALPLTNFWLLNRSNKTTSLK
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHH
RPVAPIKQLQNSHVDVSLGSDNVQDPWYPFGDFDPFYTLSCSMPMLQLNPWERMTLSSIF
CCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHH
LAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSRNLKRKVFINGDLYC
HCHHHHCCCCHHCHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
SNSGTAEVLIPRSLFVIEDIDNLIIDVEDLCSVSISWEDGFVSELKPLKNKITKPKNIL
CCCCCEEEEECCCEEEEECHHHHEEEHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCC
FPRFVEPHSHFDKSFTWAAFPNLESNYGGALSANLQEHKTRSTDKVLERVDKSLKLAIQN
CCCCCCCHHHCCCCCEEEECCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTYKGQSIDIWSELFKLQKKFSSELTLQYVALAPLEFWNTTDGEDLAKMFS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCHHHHHHHHH
SNGGILGGVVVPPFNKKDTSKFLAKMLLLASKNKLEIDLHIDESIIEPGAGIKVLLETIE
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCHHHHHHHHH
NLNINSIPITCSHLSSLISLTNREILKLGEKMAERNIKVIALPLTNFWLLNRSNKTTSLK
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHH
RPVAPIKQLQNSHVDVSLGSDNVQDPWYPFGDFDPFYTLSCSMPMLQLNPWERMTLSSIF
CCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHH
LAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSRNLKRKVFINGDLYC
HCHHHHCCCCHHCHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]