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The map label for this gene is glcD [H]

Identifier: 126696827

GI number: 126696827

Start: 1258152

End: 1259510

Strand: Reverse

Name: glcD [H]

Synonym: P9301_14891

Alternate gene names: 126696827

Gene position: 1259510-1258152 (Counterclockwise)

Preceding gene: 126696828

Following gene: 126696824

Centisome position: 76.71

GC content: 33.41

Gene sequence:

>1359_bases
ATGATATCAATATCAAAACTCAAATTTATAGACAAATTTAGAGAAGTCGAAAACTTAGAGATTATTGAAAATAAATCTGA
TGTAAAAAGACTTTCAAAAGATTTTTATAACTACTCTCCAATCCTTACTGAAAAATTAGATGAATGTATTGCTGATTTGG
TGGTAAGACCTAGTGATCACAAAGCGGTAAAGGAAGTAGCAGAAATTTGTTGGGAATTATCTATCCCACTTACTTTAAGG
GGTTCAGGTACAGGTAATTATGGACAAGCTGTCCCATTATTTAAAGGAGTTGTAATGCAGATGAGTCAATTCAATAAGTT
AGAAGAATTTGATCCATCCACAGGCTTTGTAAAAGTACAGTCTGGCTGTGTTATGGGAGATTTGAATAAACAATTAGAGA
AATATGGGAGGGAATTGAGGTTACTTCCTAGTACTTGGAAAACTGCAACAATTGGAGGTTTTATTGCAGGTGGATCAGGA
GGTATTGGTTCCATTAGATGGGGATTTTTAAGAGACCCAGGAAATCTTATAGGTTTAGAGGCAGTAACGATGAATGAAAA
ACCTGCATTATTAAAATTTGATGCTGAAGAATCCGAACCTCTAAATCATGCTTATGGGACTAATGGAATAATTACTTCTT
TATTACTTGCTACTGATATCAAACGTAAGTGGTACTCATTAGTTATTGACTGTATTGAATTTGAAAAAACAATAGAAATA
TTAAAAACTCTTACTAGCGCAGCAATCAACCTGAAATTAGGAGCAATTCTTGAAGAGGAAATTGTAGATCAAATGCCAAA
ATGGTTTAAAAGTAAATCTAGAAGTCACAAGGTATTAATTCAATCTACTTTTGGAGGAATAAAAACCATCGAGCTAATTT
GTAAAAAATTTAAAGTTGAATCTACCCTACTTGGGGAAGAAGAAAAGCTCGTGAATGGAATTTCTGAAGTCGTATGGAAT
CATACAACTCTTCATATGAGGTCTAGGGATAAAAATTGGACTTATTTACAGATGCTTTTGCCACTTAATAATGAAATAGA
ATTAATTAATTTTTTGAGAAAAAAATGGGGTAAAAAAGTTCTTTGGCATTTAGAGGCAGTTTCTCAACAAGGATCACCGC
GATTAGCGGCTTTGCCTGTATTAAAGTGGAACGGGGCAGAAGAATTAAATGAAATAATGGAAGATTGCAAGAAACTTGGT
GCTTTTATTTTTAATCCTCATGTTTTAACAGTTGAAGGCGGAGGTCTCGGAGTAGTGGATGCAGATCAAGTAAAAGCGAA
ATTAAGATTTGATCCTAAAGGGCTTTTAAATCCTGGAAAATTGGAAGGTTGGGAAGTAAAAGAACAATTTAAAATTTAA

Upstream 100 bases:

>100_bases
CAGATGTTTTTTCGAGAAATTTAAAGAGAAAAGTATTTATAAACGGCGATTTATATTGTTAATTGGCTAATTTATATACA
AACCATAAAAATTTTTATTA

Downstream 100 bases:

>100_bases
TTTTTTTCTTTATTCGCAAATTTAATAAATTCAGCAACTAAAAAAATAGAACCTGTTAGAACAGGATGATTAGGTGGCCA
TTTTTCTAGGGAAAATAAAT

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MISISKLKFIDKFREVENLEIIENKSDVKRLSKDFYNYSPILTEKLDECIADLVVRPSDHKAVKEVAEICWELSIPLTLR
GSGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPSTGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSG
GIGSIRWGFLRDPGNLIGLEAVTMNEKPALLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSLVIDCIEFEKTIEI
LKTLTSAAINLKLGAILEEEIVDQMPKWFKSKSRSHKVLIQSTFGGIKTIELICKKFKVESTLLGEEEKLVNGISEVVWN
HTTLHMRSRDKNWTYLQMLLPLNNEIELINFLRKKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGAEELNEIMEDCKKLG
AFIFNPHVLTVEGGGLGVVDADQVKAKLRFDPKGLLNPGKLEGWEVKEQFKI

Sequences:

>Translated_452_residues
MISISKLKFIDKFREVENLEIIENKSDVKRLSKDFYNYSPILTEKLDECIADLVVRPSDHKAVKEVAEICWELSIPLTLR
GSGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPSTGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSG
GIGSIRWGFLRDPGNLIGLEAVTMNEKPALLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSLVIDCIEFEKTIEI
LKTLTSAAINLKLGAILEEEIVDQMPKWFKSKSRSHKVLIQSTFGGIKTIELICKKFKVESTLLGEEEKLVNGISEVVWN
HTTLHMRSRDKNWTYLQMLLPLNNEIELINFLRKKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGAEELNEIMEDCKKLG
AFIFNPHVLTVEGGGLGVVDADQVKAKLRFDPKGLLNPGKLEGWEVKEQFKI
>Mature_452_residues
MISISKLKFIDKFREVENLEIIENKSDVKRLSKDFYNYSPILTEKLDECIADLVVRPSDHKAVKEVAEICWELSIPLTLR
GSGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPSTGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSG
GIGSIRWGFLRDPGNLIGLEAVTMNEKPALLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSLVIDCIEFEKTIEI
LKTLTSAAINLKLGAILEEEIVDQMPKWFKSKSRSHKVLIQSTFGGIKTIELICKKFKVESTLLGEEEKLVNGISEVVWN
HTTLHMRSRDKNWTYLQMLLPLNNEIELINFLRKKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGAEELNEIMEDCKKLG
AFIFNPHVLTVEGGGLGVVDADQVKAKLRFDPKGLLNPGKLEGWEVKEQFKI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=202, Percent_Identity=25.2475247524752, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789351, Length=425, Percent_Identity=23.0588235294118, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787977, Length=173, Percent_Identity=32.3699421965318, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=205, Percent_Identity=28.780487804878, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6320764, Length=198, Percent_Identity=26.7676767676768, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320023, Length=135, Percent_Identity=28.1481481481481, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18921117, Length=260, Percent_Identity=25.3846153846154, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24639277, Length=260, Percent_Identity=25.3846153846154, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24639275, Length=260, Percent_Identity=25.3846153846154, Blast_Score=76, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50866; Mature: 50866

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISISKLKFIDKFREVENLEIIENKSDVKRLSKDFYNYSPILTEKLDECIADLVVRPSDH
CCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
KAVKEVAEICWELSIPLTLRGSGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPSTGFVKVQ
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
SGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGGIGSIRWGFLRDPGNLIGLE
CCCEEHHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCCEEEEEECCCCCEEEEE
AVTMNEKPALLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSLVIDCIEFEKTIEI
EEEECCCCCEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKTLTSAAINLKLGAILEEEIVDQMPKWFKSKSRSHKVLIQSTFGGIKTIELICKKFKVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
STLLGEEEKLVNGISEVVWNHTTLHMRSRDKNWTYLQMLLPLNNEIELINFLRKKWGKKV
HHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHH
LWHLEAVSQQGSPRLAALPVLKWNGAEELNEIMEDCKKLGAFIFNPHVLTVEGGGLGVVD
HHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCCC
ADQVKAKLRFDPKGLLNPGKLEGWEVKEQFKI
HHHHHEEEEECCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MISISKLKFIDKFREVENLEIIENKSDVKRLSKDFYNYSPILTEKLDECIADLVVRPSDH
CCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
KAVKEVAEICWELSIPLTLRGSGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPSTGFVKVQ
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
SGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGGIGSIRWGFLRDPGNLIGLE
CCCEEHHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCCEEEEEECCCCCEEEEE
AVTMNEKPALLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSLVIDCIEFEKTIEI
EEEECCCCCEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKTLTSAAINLKLGAILEEEIVDQMPKWFKSKSRSHKVLIQSTFGGIKTIELICKKFKVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
STLLGEEEKLVNGISEVVWNHTTLHMRSRDKNWTYLQMLLPLNNEIELINFLRKKWGKKV
HHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHH
LWHLEAVSQQGSPRLAALPVLKWNGAEELNEIMEDCKKLGAFIFNPHVLTVEGGGLGVVD
HHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCCC
ADQVKAKLRFDPKGLLNPGKLEGWEVKEQFKI
HHHHHEEEEECCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]