Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is yjeF [C]
Identifier: 126696813
GI number: 126696813
Start: 1243824
End: 1245389
Strand: Reverse
Name: yjeF [C]
Synonym: P9301_14751
Alternate gene names: 126696813
Gene position: 1245389-1243824 (Counterclockwise)
Preceding gene: 126696815
Following gene: 126696812
Centisome position: 75.85
GC content: 33.52
Gene sequence:
>1566_bases ATGAATGAAATTGTATGGCCAACAATTGATTCTAAACATTTAATTGTTGATTCAAAGCAAATGTTGATAGTAGAGAAAGA AATGTTTTCTGATGGAATGCCACAAGAAGCATTGATGGAAAAAGCTGGTATCCAAATTAGTAGATGGCTTCTAAAAAAGA AACCTCTTCTCAAGAATGGAATAACTGTTTTTATAGGTCCTGGGCATAATGGCGGGGATGGTGCAGTGATAGCTAGAGAG CTTTTTTTGAAAGGTTTTTATGTTCAAGTATGGTGTCCATTCCCGATAAAAAAAACACTAACAAATGACCACCTTAATTA TCTTACATCTATTGGTGTCACAAAATTAGTAGAGCCTCCTGATGCAAATGGGAAAGATCTTTGGATTGATGCAGTTTTTG GTAATAATCAAACAAGAAAAGTCGATGATAGATTAATTAAACTGTTTAATCAAAAATTTCATAACAAATATAGCAAGGTA ATAAGTATTGATATTCCAACAGGATTATGTCCTGATAAAGGACAGCCTTTTTTAGATAAAGCTGTAAAGGCAGACTATAC CTTGGCAATTGGTCTTAATAAGATTGGGTTAACTCAAGATTCTGCATTGCCTTTTATTGGAGAATTGCACCATATAGATG TTGGGGTACCTATTAGTAAACTGTCAAAAGTTGATAAAAAGATTTTTAAGGTTACTTACAAAGATTTAAAAAATATTGAT TTACCTTCTTTACCAAAAAATTCCAACAAATATAAAAGAGGTAGAACATTATTAATAGCTGGAAGTGAAAAATATCCTGG CGCTGCATACTTAGCATTAAAAGGCGCGATATCAAGTGGAGCAGGTTATGTCTCCGCTGTCCTTCCTGAGGTAGTTGCTG AATCTATTTGGCAAGTTGCTCCAGAAATAGTTTTAAAGGATATTATGCAGTCTAATCAGAATGGAAATGCATCTTTATTT GGTGCATTAAAAAATATTGATTTAAGTGCATTTGATTCAGTAGCTGTCGGCCCAGGAATAGGAATTGATAATGATGATTG GCAAAAATCAAAAGACTATCTTTTGGATTATGGAGGGTTATTGATCTTGGATGCAGATGCACTTAATAGAATTTCGGAAT CTAAGTTAGGGGCAAATTTCTTTTTAGAGAGAAAATTTAAAACATGGATTACACCTCATAGCAAAGAATTTCGAAGGTTA TTCCCTAATATCAATTCTTCTACCAATTTAGGGCTAGCTCTTGATGCAGCAAAAGAATTTAACATTGGTATTTTATTTAA GGGAGCTAATAGCATAGTTGCTGATAGTAAAAAAGTTTGGCAACTTTTCGGAACCGATTCACAGACAGCTCGAGCTGGAT TAGGTGATCTTTTATCTGGATTTATAGCAGGGAGTTCTGCGATTGATTTAACCTTTTGTAGAAACATAACAGCAGAATAT TTTGCTAAATACGTACTTTTGCATTCATTTGCTGCATCAAAGTGCAAAAAAGGGTCAAATGCATCTGCTATTGGTGACGA ATTGTCAAAATTAATGAGAAATAAAAAAATGAGACAAATATCTTGA
Upstream 100 bases:
>100_bases ATTATTAGAAGAAAAAAAGTTCTCTAATTTTTTATCCTTTTGTGTCTTTAACATGGAAGTTTAAATTTTTGAACAGTTCT TCAATTGCTTTGTACTAATT
Downstream 100 bases:
>100_bases AAGAAACAATTTAGGAGAGTTATTTATAGTTTTAAACACATAAGTGTACAAATATTACTTGAAATCTGAAGCGCGCATTA AATATTTGGCTTTTTCATTA
Product: fused sugar kinase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MNEIVWPTIDSKHLIVDSKQMLIVEKEMFSDGMPQEALMEKAGIQISRWLLKKKPLLKNGITVFIGPGHNGGDGAVIARE LFLKGFYVQVWCPFPIKKTLTNDHLNYLTSIGVTKLVEPPDANGKDLWIDAVFGNNQTRKVDDRLIKLFNQKFHNKYSKV ISIDIPTGLCPDKGQPFLDKAVKADYTLAIGLNKIGLTQDSALPFIGELHHIDVGVPISKLSKVDKKIFKVTYKDLKNID LPSLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGYVSAVLPEVVAESIWQVAPEIVLKDIMQSNQNGNASLF GALKNIDLSAFDSVAVGPGIGIDNDDWQKSKDYLLDYGGLLILDADALNRISESKLGANFFLERKFKTWITPHSKEFRRL FPNINSSTNLGLALDAAKEFNIGILFKGANSIVADSKKVWQLFGTDSQTARAGLGDLLSGFIAGSSAIDLTFCRNITAEY FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNKKMRQIS
Sequences:
>Translated_521_residues MNEIVWPTIDSKHLIVDSKQMLIVEKEMFSDGMPQEALMEKAGIQISRWLLKKKPLLKNGITVFIGPGHNGGDGAVIARE LFLKGFYVQVWCPFPIKKTLTNDHLNYLTSIGVTKLVEPPDANGKDLWIDAVFGNNQTRKVDDRLIKLFNQKFHNKYSKV ISIDIPTGLCPDKGQPFLDKAVKADYTLAIGLNKIGLTQDSALPFIGELHHIDVGVPISKLSKVDKKIFKVTYKDLKNID LPSLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGYVSAVLPEVVAESIWQVAPEIVLKDIMQSNQNGNASLF GALKNIDLSAFDSVAVGPGIGIDNDDWQKSKDYLLDYGGLLILDADALNRISESKLGANFFLERKFKTWITPHSKEFRRL FPNINSSTNLGLALDAAKEFNIGILFKGANSIVADSKKVWQLFGTDSQTARAGLGDLLSGFIAGSSAIDLTFCRNITAEY FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNKKMRQIS >Mature_521_residues MNEIVWPTIDSKHLIVDSKQMLIVEKEMFSDGMPQEALMEKAGIQISRWLLKKKPLLKNGITVFIGPGHNGGDGAVIARE LFLKGFYVQVWCPFPIKKTLTNDHLNYLTSIGVTKLVEPPDANGKDLWIDAVFGNNQTRKVDDRLIKLFNQKFHNKYSKV ISIDIPTGLCPDKGQPFLDKAVKADYTLAIGLNKIGLTQDSALPFIGELHHIDVGVPISKLSKVDKKIFKVTYKDLKNID LPSLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGYVSAVLPEVVAESIWQVAPEIVLKDIMQSNQNGNASLF GALKNIDLSAFDSVAVGPGIGIDNDDWQKSKDYLLDYGGLLILDADALNRISESKLGANFFLERKFKTWITPHSKEFRRL FPNINSSTNLGLALDAAKEFNIGILFKGANSIVADSKKVWQLFGTDSQTARAGLGDLLSGFIAGSSAIDLTFCRNITAEY FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNKKMRQIS
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=443, Percent_Identity=25.5079006772009, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI221329809, Length=210, Percent_Identity=30, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 57303; Mature: 57303
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIVWPTIDSKHLIVDSKQMLIVEKEMFSDGMPQEALMEKAGIQISRWLLKKKPLLKNG CCCCCCCCCCCCEEEECCCCEEEEEHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCHHHCC ITVFIGPGHNGGDGAVIARELFLKGFYVQVWCPFPIKKTLTNDHLNYLTSIGVTKLVEPP CEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCCC DANGKDLWIDAVFGNNQTRKVDDRLIKLFNQKFHNKYSKVISIDIPTGLCPDKGQPFLDK CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHH AVKADYTLAIGLNKIGLTQDSALPFIGELHHIDVGVPISKLSKVDKKIFKVTYKDLKNID HHCCCEEEEEECCCCCCCCCCCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC LPSLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGYVSAVLPEVVAESIWQVA CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH PEIVLKDIMQSNQNGNASLFGALKNIDLSAFDSVAVGPGIGIDNDDWQKSKDYLLDYGGL HHHHHHHHHHCCCCCCEEEEHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHEECCCE LILDADALNRISESKLGANFFLERKFKTWITPHSKEFRRLFPNINSSTNLGLALDAAKEF EEEEHHHHHHHHHHHCCCHHEEEEHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEECCCCC NIGILFKGANSIVADSKKVWQLFGTDSQTARAGLGDLLSGFIAGSSAIDLTFCRNITAEY CEEEEEECCCCHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCHHHH FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNKKMRQIS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEIVWPTIDSKHLIVDSKQMLIVEKEMFSDGMPQEALMEKAGIQISRWLLKKKPLLKNG CCCCCCCCCCCCEEEECCCCEEEEEHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCHHHCC ITVFIGPGHNGGDGAVIARELFLKGFYVQVWCPFPIKKTLTNDHLNYLTSIGVTKLVEPP CEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCCC DANGKDLWIDAVFGNNQTRKVDDRLIKLFNQKFHNKYSKVISIDIPTGLCPDKGQPFLDK CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHH AVKADYTLAIGLNKIGLTQDSALPFIGELHHIDVGVPISKLSKVDKKIFKVTYKDLKNID HHCCCEEEEEECCCCCCCCCCCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC LPSLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGYVSAVLPEVVAESIWQVA CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH PEIVLKDIMQSNQNGNASLFGALKNIDLSAFDSVAVGPGIGIDNDDWQKSKDYLLDYGGL HHHHHHHHHHCCCCCCEEEEHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHEECCCE LILDADALNRISESKLGANFFLERKFKTWITPHSKEFRRLFPNINSSTNLGLALDAAKEF EEEEHHHHHHHHHHHCCCHHEEEEHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEECCCCC NIGILFKGANSIVADSKKVWQLFGTDSQTARAGLGDLLSGFIAGSSAIDLTFCRNITAEY CEEEEEECCCCHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHCHHHH FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNKKMRQIS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]