Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is yjhC [C]
Identifier: 126696752
GI number: 126696752
Start: 1180571
End: 1181539
Strand: Reverse
Name: yjhC [C]
Synonym: P9301_14141
Alternate gene names: 126696752
Gene position: 1181539-1180571 (Counterclockwise)
Preceding gene: 126696753
Following gene: 126696751
Centisome position: 71.96
GC content: 28.59
Gene sequence:
>969_bases GTGAAATTTGAAAAGCTATTAGTTTATGGTCCTGGAAGTATTGGCCTTAAACATATAAATGCAGGAAAAAAAATAAATCG GTTTCTGAAAATTGGAGTTTTACGTTCAAGGGAAATTAATGGAGATGATTCAGAAAAAAATAATTGGTTAGAATTTAAAT CTATAAGAGAAGCTATTTCTTGGTCGCCAGACTTAATAATTATTTCAACGCCGGCTAATTTGCATTTAAGTCACATAAAA GAATTTTTATTATTAAATATTCCTATATTGCTTGAAAAACCTATAGGTTGTGAACAAGATAATCTTGAAGAATGGATTTC TTTAAATAAGAAAAAAACATCAACAATTTCTGTTGGATATCAATTAAGGTTTGATCCATGTTATTCAATAATTAGTGATA TTCTTAAGAAAAATGGTATAGGAGAAATATTTTCTTCCCACTTCTTCTGTGGCTCATGGCTTCCAAATTGGCGTGAGAAA GATTATCGAAGAACTGTTTCAGCTTCAAATGAACTTGGAGGAGGAGTAGTATCTGAATTAAGCCATGAATTAGATTTGTG TTTGAGTTTATTAGGGCCTATAAATGTTGAATGGTGTAAAAAAAATAATAGTGGAATATTAGATATAAATTGCGACGATA ATTTACATTTAGTGGCATCCTCTAATAAAAGTTCAAAAATTATTATTGATTTGGACTTTTGTACTTTTTCGGAGAGAAGA TTTATTTTGATGAGGGGAATAAAAGGGGAGATTCTATGGGATATAACAAAAGGGAAATTAATAAAAAAAGATGATAAAGG TACTCAAATTTTAAAAAATTCATCTCGTGATTCTCAACTTATGCTTGTAAACCAAATTAAGGATATAATAAATAAAACAA ATTCTTCAGAATCTATTGGGTGTTCACTAACAGAAGGGATATCTGTTTTAGAACTCATAAAATTAATAAATAACAAATGT AACTTATGA
Upstream 100 bases:
>100_bases ATGGCATAAAAAATTAAATGTAAATTTCTCAAAATGATCTTTTATAAGTAGATTTTTTATCAGGTTATATTGTAGTTTAA ATAATAATATCTGAGCTTTT
Downstream 100 bases:
>100_bases GTAAAGACTTTTACGCCTTTATTTTTGCAAGAGGTGGTTCAAAAGGAATAACAAAAAAAAACCTTAGAAAAATAAATGGT ATTTCTTTGGTAAGAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase Domain Protein; Dehydrogenase; Oxidoreductase Domain-Containing Protein; Dehydrogenase-Like Protein; Oxidoreductase Gfo/Idh/MocA Family; Oxidoreductase Family Protein; Oxidoreductase-Like; Flagellin Protein PtmF; Oxidoreductase GFO/Idh/MocA Family Protein; Oxidoreductase-Like Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKFEKLLVYGPGSIGLKHINAGKKINRFLKIGVLRSREINGDDSEKNNWLEFKSIREAISWSPDLIIISTPANLHLSHIK EFLLLNIPILLEKPIGCEQDNLEEWISLNKKKTSTISVGYQLRFDPCYSIISDILKKNGIGEIFSSHFFCGSWLPNWREK DYRRTVSASNELGGGVVSELSHELDLCLSLLGPINVEWCKKNNSGILDINCDDNLHLVASSNKSSKIIIDLDFCTFSERR FILMRGIKGEILWDITKGKLIKKDDKGTQILKNSSRDSQLMLVNQIKDIINKTNSSESIGCSLTEGISVLELIKLINNKC NL
Sequences:
>Translated_322_residues MKFEKLLVYGPGSIGLKHINAGKKINRFLKIGVLRSREINGDDSEKNNWLEFKSIREAISWSPDLIIISTPANLHLSHIK EFLLLNIPILLEKPIGCEQDNLEEWISLNKKKTSTISVGYQLRFDPCYSIISDILKKNGIGEIFSSHFFCGSWLPNWREK DYRRTVSASNELGGGVVSELSHELDLCLSLLGPINVEWCKKNNSGILDINCDDNLHLVASSNKSSKIIIDLDFCTFSERR FILMRGIKGEILWDITKGKLIKKDDKGTQILKNSSRDSQLMLVNQIKDIINKTNSSESIGCSLTEGISVLELIKLINNKC NL >Mature_322_residues MKFEKLLVYGPGSIGLKHINAGKKINRFLKIGVLRSREINGDDSEKNNWLEFKSIREAISWSPDLIIISTPANLHLSHIK EFLLLNIPILLEKPIGCEQDNLEEWISLNKKKTSTISVGYQLRFDPCYSIISDILKKNGIGEIFSSHFFCGSWLPNWREK DYRRTVSASNELGGGVVSELSHELDLCLSLLGPINVEWCKKNNSGILDINCDDNLHLVASSNKSSKIIIDLDFCTFSERR FILMRGIKGEILWDITKGKLIKKDDKGTQILKNSSRDSQLMLVNQIKDIINKTNSSESIGCSLTEGISVLELIKLINNKC NL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36365; Mature: 36365
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEKLLVYGPGSIGLKHINAGKKINRFLKIGVLRSREINGDDSEKNNWLEFKSIREAIS CCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC WSPDLIIISTPANLHLSHIKEFLLLNIPILLEKPIGCEQDNLEEWISLNKKKTSTISVGY CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEE QLRFDPCYSIISDILKKNGIGEIFSSHFFCGSWLPNWREKDYRRTVSASNELGGGVVSEL EEEECHHHHHHHHHHHCCCHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHH SHELDLCLSLLGPINVEWCKKNNSGILDINCDDNLHLVASSNKSSKIIIDLDFCTFSERR HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCE FILMRGIKGEILWDITKGKLIKKDDKGTQILKNSSRDSQLMLVNQIKDIINKTNSSESIG EEEEECCCCCEEEEECCCCEEEECCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCC CSLTEGISVLELIKLINNKCNL CCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFEKLLVYGPGSIGLKHINAGKKINRFLKIGVLRSREINGDDSEKNNWLEFKSIREAIS CCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC WSPDLIIISTPANLHLSHIKEFLLLNIPILLEKPIGCEQDNLEEWISLNKKKTSTISVGY CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEE QLRFDPCYSIISDILKKNGIGEIFSSHFFCGSWLPNWREKDYRRTVSASNELGGGVVSEL EEEECHHHHHHHHHHHCCCHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHH SHELDLCLSLLGPINVEWCKKNNSGILDINCDDNLHLVASSNKSSKIIIDLDFCTFSERR HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCE FILMRGIKGEILWDITKGKLIKKDDKGTQILKNSSRDSQLMLVNQIKDIINKTNSSESIG EEEEECCCCCEEEEECCCCEEEECCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCC CSLTEGISVLELIKLINNKCNL CCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA