Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is glmU [H]
Identifier: 126696743
GI number: 126696743
Start: 1172930
End: 1174000
Strand: Reverse
Name: glmU [H]
Synonym: P9301_14051
Alternate gene names: 126696743
Gene position: 1174000-1172930 (Counterclockwise)
Preceding gene: 126696744
Following gene: 126696737
Centisome position: 71.5
GC content: 26.61
Gene sequence:
>1071_bases ATGAAAAGGAATTTTTTTATTAAAAACTGTAGAGATTTTTCTGTAAACATTAAGGATAATGTAGGGGAAGCTATTCAAAA GATAAATAAAGGTGGCTTCCAAATTTGTCTAGTTTTTAACGAGCAAAATTATTTGGAAGGAATAATAACTGATAGTGATT TAAGAAGAGGAATTTTAAATGGCGTTTCAAAAAGTAGTAAATTATCTGATGTAATAAACTATCAACCTATTAAAGTTCAT GAATTTTTATCAGAAGAAAAAATTTATAGATTAATGATAAAGAATCATATTTTTCATATACCTTTAGTTGATGAAAATAA TAAATTTAAGGGCATCTTTGTTTCTAATAATTTAATAGAAGAGAGTTTTATTAATGAAACCTTTTTTATATTAGCTGGAG GTAAAGGTTTAAGAATGAGACCTTTAACTAAAAATCTTCCTAAACCAATGTTGCATATAAGTGGTAAGCCAATGATCGAA TTAATAATTAATAATGCAAAGGAGTTTGGCTTCAGAAATTTTGTCCTGTCAATTGGTTATTTGGGAGAGGTAATAAAGGA ATATTTTGGTAATGGGGATAAATTTGGGATTAATATAAGCTATATTCAAGAAGAAAAACCCCTGGGGACTGCAGGTTCAT TAGCATATTTAAAAAAAGATTTGCTTACTGATTATGTTTTTATTACCAATGGTGATGTTGTAACATCATTAGAATATAGT AATATGTTGAATTTTGCCAAATATACAAAAGCTGATGGAGTAATTGCTGTTAAAGAATTTGGATTGCAAAATCCATTTGG AGTAATTGAAACTAGTAATGATAATTTTATTGGAATTTCTGAAAAACCAATATATAAATCTACAATTAATGCTGGAGTTT ATGTTGTTTCAAAAAATTTGATTGGTTTAATAGAAAAGGGGAAACATATTGATATGAATCAATTATTTGAACTAGGTATA AATAAGAAAAAAATTTTAAAAGTTTTTGCTTTGCATGAAGAATGGACGGATGTAGGAAGACCTGAAGATTATAAAAGGAT TAGAAATTCAAGTAAAGCTAATGAAATCTAA
Upstream 100 bases:
>100_bases ATAAAGTTTGTACTTATATAAAAACTATACATATAATTGATTCAAGTATAAAAAAGTTTAGAAAAATCTTTAAAGACTAT AAATTTAATTTATTGTAAGT
Downstream 100 bases:
>100_bases TTTACTTGTGATAAAAAATTTTCAAATTTAGAAAAATTTATTTCCTTGAAATATTTTTCATAATACTTTGACTTTAAATA TATCTTGATGGAACTATCAA
Product: nucleoside-diphosphate-sugar pyrophosphorylase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKRNFFIKNCRDFSVNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILNGVSKSSKLSDVINYQPIKVH EFLSEEKIYRLMIKNHIFHIPLVDENNKFKGIFVSNNLIEESFINETFFILAGGKGLRMRPLTKNLPKPMLHISGKPMIE LIINNAKEFGFRNFVLSIGYLGEVIKEYFGNGDKFGINISYIQEEKPLGTAGSLAYLKKDLLTDYVFITNGDVVTSLEYS NMLNFAKYTKADGVIAVKEFGLQNPFGVIETSNDNFIGISEKPIYKSTINAGVYVVSKNLIGLIEKGKHIDMNQLFELGI NKKKILKVFALHEEWTDVGRPEDYKRIRNSSKANEI
Sequences:
>Translated_356_residues MKRNFFIKNCRDFSVNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILNGVSKSSKLSDVINYQPIKVH EFLSEEKIYRLMIKNHIFHIPLVDENNKFKGIFVSNNLIEESFINETFFILAGGKGLRMRPLTKNLPKPMLHISGKPMIE LIINNAKEFGFRNFVLSIGYLGEVIKEYFGNGDKFGINISYIQEEKPLGTAGSLAYLKKDLLTDYVFITNGDVVTSLEYS NMLNFAKYTKADGVIAVKEFGLQNPFGVIETSNDNFIGISEKPIYKSTINAGVYVVSKNLIGLIEKGKHIDMNQLFELGI NKKKILKVFALHEEWTDVGRPEDYKRIRNSSKANEI >Mature_356_residues MKRNFFIKNCRDFSVNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILNGVSKSSKLSDVINYQPIKVH EFLSEEKIYRLMIKNHIFHIPLVDENNKFKGIFVSNNLIEESFINETFFILAGGKGLRMRPLTKNLPKPMLHISGKPMIE LIINNAKEFGFRNFVLSIGYLGEVIKEYFGNGDKFGINISYIQEEKPLGTAGSLAYLKKDLLTDYVFITNGDVVTSLEYS NMLNFAKYTKADGVIAVKEFGLQNPFGVIETSNDNFIGISEKPIYKSTINAGVYVVSKNLIGLIEKGKHIDMNQLFELGI NKKKILKVFALHEEWTDVGRPEDYKRIRNSSKANEI
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=227, Percent_Identity=31.7180616740088, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI11761619, Length=227, Percent_Identity=31.7180616740088, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI133931050, Length=226, Percent_Identity=33.1858407079646, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17509979, Length=185, Percent_Identity=30.8108108108108, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509981, Length=178, Percent_Identity=29.7752808988764, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6320148, Length=226, Percent_Identity=33.6283185840708, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355443, Length=226, Percent_Identity=30.0884955752212, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644084, Length=226, Percent_Identity=30.0884955752212, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24653912, Length=196, Percent_Identity=30.6122448979592, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 40461; Mature: 40461
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNFFIKNCRDFSVNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILN CCCCEEEECCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH GVSKSSKLSDVINYQPIKVHEFLSEEKIYRLMIKNHIFHIPLVDENNKFKGIFVSNNLIE HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCHHH ESFINETFFILAGGKGLRMRPLTKNLPKPMLHISGKPMIELIINNAKEFGFRNFVLSIGY HHHCCCEEEEEECCCCCEECCHHHCCCCCEEEECCCCEEEEEECCHHHCCHHHHHHHHHH LGEVIKEYFGNGDKFGINISYIQEEKPLGTAGSLAYLKKDLLTDYVFITNGDVVTSLEYS HHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEEEHH NMLNFAKYTKADGVIAVKEFGLQNPFGVIETSNDNFIGISEKPIYKSTINAGVYVVSKNL HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEECCCCCCCHHHCCCCEEEEECCH IGLIEKGKHIDMNQLFELGINKKKILKVFALHEEWTDVGRPEDYKRIRNSSKANEI HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MKRNFFIKNCRDFSVNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILN CCCCEEEECCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH GVSKSSKLSDVINYQPIKVHEFLSEEKIYRLMIKNHIFHIPLVDENNKFKGIFVSNNLIE HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCHHH ESFINETFFILAGGKGLRMRPLTKNLPKPMLHISGKPMIELIINNAKEFGFRNFVLSIGY HHHCCCEEEEEECCCCCEECCHHHCCCCCEEEECCCCEEEEEECCHHHCCHHHHHHHHHH LGEVIKEYFGNGDKFGINISYIQEEKPLGTAGSLAYLKKDLLTDYVFITNGDVVTSLEYS HHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEEEHH NMLNFAKYTKADGVIAVKEFGLQNPFGVIETSNDNFIGISEKPIYKSTINAGVYVVSKNL HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEECCCCCCCHHHCCCCEEEEECCH IGLIEKGKHIDMNQLFELGINKKKILKVFALHEEWTDVGRPEDYKRIRNSSKANEI HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]