Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is opcA [H]

Identifier: 126696518

GI number: 126696518

Start: 991842

End: 993143

Strand: Reverse

Name: opcA [H]

Synonym: P9301_11801

Alternate gene names: 126696518

Gene position: 993143-991842 (Counterclockwise)

Preceding gene: 126696519

Following gene: 126696516

Centisome position: 60.49

GC content: 32.95

Gene sequence:

>1302_bases
ATGAAACCTCAACTTACACTCCAAACCCCGCTAGAGCTGCCTTATGAGGAGATTTCTAATTACCTTAATAAATTATGGGT
TTCAGAAGATAGTGATAATACTGGCGCTAATACTTTTACACTAATGATCTGGCAGCCTGCTTGGCTAGAACAATGTTTGG
TTCAAAAAGGATTATTAAATGGACCAATTACTGGAAATTTAAGTCCTGAGATAATTGAAGTTGCTAAAAAGTTCATATTA
GATGAGGGACTCCCAATCTCTACATCCCTTAATAGTGAAGAATTATTGAATTTATTGAAGGAAAATTTATCTAATAAAGA
CTTTGAAGACTTTAGAGGACAATTTTTTGAATCATCAATAAGTACATTGAATCCAAGAAGATTAATAACTCTAGCGCCAA
CGTTAAATAAAAATTCAGATATCAAAACTTTTGTATCCGCTTACTGTCCATTAAGTGATACTCCAGCTATGCAACCTATC
TGTGGGGATTTAGTCGTTATTAGGGGAGACTCAGCCTCAATATCCAATAAAGGATTAAAAATAATTGATGAATTATCTAT
TGAGGAATTACCTTCATGGTTGTGGTGGAATGGAAGCTTGGATGAATCACCTGAAATCTTCGAATATTTTACTAATTATG
GTCTAAGGTTAATAATTGATACTGCTCTTGGATCACCATACAGATGTTTAAAAGTTTTAGATCAATTAAATAATTCAGAC
AAAGCTATTAATGATTTAAATTGGGTTAGGTTGAAAAATTGGAGGGAATCATTGGCAATGATTTTTGATCCGCCTTCGAG
AAGACCAATATTAGATCATATTACTGATGTTGATATTGATATCGCAGGGGATCATATGATTCAAGCTTTGTTTTTGATCT
CATGGATTAGCGATAAACTTGGTTGGTCTTTTCTAAGAGTTGAAAGGGGTACAGAATCAACAAAAATAGAGTTTGAAAGA
ATTAATGGCGAAATAATTTCTGCGTCAATTAATCCTTTATCTTTGGGGAATCCAAGTATTCATTCAGGACAAGTGATTGG
ATTGAGGTTGATTTCAAGAATTAGTGAGGTTCAAAAAAATAACACTTGTGTAATACTTGGCTGTGAATCAGTGGAATGTA
TGAGACTTGAAGCAGGGGGAATGGCTAATATGGAATTAATAGAGCAAGTTGTTCCAAATTCTTTTTCTTCATCAGAGTAT
GACGTTAGTAAATTATTGGGTAGTAGTAGAGGTAATACAAGCCCTCTTTTTGAAAATTCTATTAAAATAGCTCTTCAAAT
ATTTAATGGTTTTAAAAACTAA

Upstream 100 bases:

>100_bases
GGAAGTTACCTATTTATAATTATGAATCCATGACGTGGGGACCTCCTGAATCTGATCAATTACTCTCAAAAGATAATATT
TTCTGGCGTAGACCTTAAAA

Downstream 100 bases:

>100_bases
TAAATGCCTTGTGTAATATCTTCTCCTTCAACTGATAGTGGGAAAACTACATTATCCCTTTTGATATCTTGTTGGGCGTT
TTCAAAAGGTATAAAGATAC

Product: putative glucose 6-phosphate dehydrogenase effector OpcA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKPQLTLQTPLELPYEEISNYLNKLWVSEDSDNTGANTFTLMIWQPAWLEQCLVQKGLLNGPITGNLSPEIIEVAKKFIL
DEGLPISTSLNSEELLNLLKENLSNKDFEDFRGQFFESSISTLNPRRLITLAPTLNKNSDIKTFVSAYCPLSDTPAMQPI
CGDLVVIRGDSASISNKGLKIIDELSIEELPSWLWWNGSLDESPEIFEYFTNYGLRLIIDTALGSPYRCLKVLDQLNNSD
KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDVDIDIAGDHMIQALFLISWISDKLGWSFLRVERGTESTKIEFER
INGEIISASINPLSLGNPSIHSGQVIGLRLISRISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSSSEY
DVSKLLGSSRGNTSPLFENSIKIALQIFNGFKN

Sequences:

>Translated_433_residues
MKPQLTLQTPLELPYEEISNYLNKLWVSEDSDNTGANTFTLMIWQPAWLEQCLVQKGLLNGPITGNLSPEIIEVAKKFIL
DEGLPISTSLNSEELLNLLKENLSNKDFEDFRGQFFESSISTLNPRRLITLAPTLNKNSDIKTFVSAYCPLSDTPAMQPI
CGDLVVIRGDSASISNKGLKIIDELSIEELPSWLWWNGSLDESPEIFEYFTNYGLRLIIDTALGSPYRCLKVLDQLNNSD
KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDVDIDIAGDHMIQALFLISWISDKLGWSFLRVERGTESTKIEFER
INGEIISASINPLSLGNPSIHSGQVIGLRLISRISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSSSEY
DVSKLLGSSRGNTSPLFENSIKIALQIFNGFKN
>Mature_433_residues
MKPQLTLQTPLELPYEEISNYLNKLWVSEDSDNTGANTFTLMIWQPAWLEQCLVQKGLLNGPITGNLSPEIIEVAKKFIL
DEGLPISTSLNSEELLNLLKENLSNKDFEDFRGQFFESSISTLNPRRLITLAPTLNKNSDIKTFVSAYCPLSDTPAMQPI
CGDLVVIRGDSASISNKGLKIIDELSIEELPSWLWWNGSLDESPEIFEYFTNYGLRLIIDTALGSPYRCLKVLDQLNNSD
KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDVDIDIAGDHMIQALFLISWISDKLGWSFLRVERGTESTKIEFER
INGEIISASINPLSLGNPSIHSGQVIGLRLISRISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSSSEY
DVSKLLGSSRGNTSPLFENSIKIALQIFNGFKN

Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]

COG id: COG3429

COG function: function code G; Glucose-6-P dehydrogenase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019297
- InterPro:   IPR004555
- InterPro:   IPR002477 [H]

Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 48553; Mature: 48553

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQLTLQTPLELPYEEISNYLNKLWVSEDSDNTGANTFTLMIWQPAWLEQCLVQKGLLN
CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCC
GPITGNLSPEIIEVAKKFILDEGLPISTSLNSEELLNLLKENLSNKDFEDFRGQFFESSI
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
STLNPRRLITLAPTLNKNSDIKTFVSAYCPLSDTPAMQPICGDLVVIRGDSASISNKGLK
HCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH
IIDELSIEELPSWLWWNGSLDESPEIFEYFTNYGLRLIIDTALGSPYRCLKVLDQLNNSD
HHHHCCHHHCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC
KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDVDIDIAGDHMIQALFLISWISDKL
HHHCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH
GWSFLRVERGTESTKIEFERINGEIISASINPLSLGNPSIHSGQVIGLRLISRISEVQKN
CCEEEEEECCCCCCEEEEEECCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCC
NTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSSSEYDVSKLLGSSRGNTSPLFENS
CCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHH
IKIALQIFNGFKN
HHHHHEEHHCCCC
>Mature Secondary Structure
MKPQLTLQTPLELPYEEISNYLNKLWVSEDSDNTGANTFTLMIWQPAWLEQCLVQKGLLN
CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCC
GPITGNLSPEIIEVAKKFILDEGLPISTSLNSEELLNLLKENLSNKDFEDFRGQFFESSI
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
STLNPRRLITLAPTLNKNSDIKTFVSAYCPLSDTPAMQPICGDLVVIRGDSASISNKGLK
HCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH
IIDELSIEELPSWLWWNGSLDESPEIFEYFTNYGLRLIIDTALGSPYRCLKVLDQLNNSD
HHHHCCHHHCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC
KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDVDIDIAGDHMIQALFLISWISDKL
HHHCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH
GWSFLRVERGTESTKIEFERINGEIISASINPLSLGNPSIHSGQVIGLRLISRISEVQKN
CCEEEEEECCCCCCEEEEEECCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCC
NTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSSSEYDVSKLLGSSRGNTSPLFENS
CCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHH
IKIALQIFNGFKN
HHHHHEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8566707 [H]