Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696490
Identifier: 126696490
GI number: 126696490
Start: 964617
End: 965846
Strand: Reverse
Name: 126696490
Synonym: P9301_11521
Alternate gene names: NA
Gene position: 965846-964617 (Counterclockwise)
Preceding gene: 126696492
Following gene: 126696488
Centisome position: 58.83
GC content: 30.24
Gene sequence:
>1230_bases GTGATTAGTCCAAATAGTTTACAAATTAGCAAAAATTGGTGGATTCAATTTCCTTATCATTTAAGGTTAATAACCAAGAT AAGATTTTTCGCTGCATTTGGAGCAGGAGGTGTTATTTATTTAACATCACTTATTTTTAATAACCTAGGATTATCGGCGA CAGATATTGGCCTGGGATTTACCATTTCAGCAATAATTGGAACCGTAACAAGACTCTTTACAGGTAATTATCTTAATAAA ACGGGAAAAATACAATTTCCGATAATTACTTCTTCAATACTAAGTATTGCCGCTAGCTTATGCCTCATTTTTTCAAGAGA TACTTTTTTGTACATAATTGGACAATCACTTGTTGGGGCTGCTGCAGGAATATATTGGCCTGCTGCCGAGTTTGGGGTTC CCTATTTTTGTCATCCTATCGAAACACGTAAAGCTTATGCCCTTGTTAGGAGTTCGGAAGCTTTAGGAATATTTCTAGGG GTATTCTTAGGGGGGTATATGACGAATTTTTTGTATTCTAAATCAATATTTATAAATGATATATTTTGCATGTTAGTTAT TACGTATTTAATATCTAGAAATAGTTCTTCTATAAAAAGGAAATTAGATAATTTTCAAAAAAAATTAGTAGATCCAATTA ATTCGGGACAATTGAAATGGAATAAAAATTCAACAATAATAATCTTATCTATTTTATTGATAACTACCTCTTTAGCCTTG ATACAAGTAACTTTGCCTCTGGATCTTGTTAAAGGTGGAGTATATCGTAATGCATTAAGCAAAGAAATTATTAGTTTTAT AATTTCTATTCAGTTAATTTTATTGTTGTTTTTACAATGGCCCGTAGGTTCTTGGATATCTAGGAAAGAAAGATTATTTG GCTTGAAATTTAGTTTAATAAATTTCACTTTCGCTTCATTTTTATTATTTATTTCTAGTTATTTAAATATCCCAGCATTT TATTTAATTTCTTTGGCATTGATTTTAGTAAGTTTAGGGACTGCTTCATTTCTTCCAACATCAACAGATGTCGTTTTCAG AATAGCTCCTTCAAATAAAAAAGGTTTTGCACTTGCTCTATTATCACAATGTTTCGCTATGGGTTATTTCTTTGGACCAT TTATTTCAGGACGCATATTAGATCTATTTGGTTATGCTTCAATAATTTGGCTTTCAATTTCTTGTTGTTGCTTTATTGCC TTTACAATTCTATTTAAGAGATTATTTTAA
Upstream 100 bases:
>100_bases ATCTCTTCAAATTTAATATTTATCTTTTCAGCAGCCTTTAAACCATTATTAAAAAATAAACCACAAAAACTAAAAAAAAT TATAAAAATGTATTTCACTA
Downstream 100 bases:
>100_bases TTAATTTTTTCTAATTCAATAATTCTTCTCTCTCTTAGAAATAAGAAAAAAGGTGCAGAGAATGCGAAGGCTATAAGAAA AGTTCCAATGTATACAACCC
Product: major facilitator superfamily multidrug-efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Multidrug-Efflux Transporter-Like
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYSKSIFINDIFCMLVITYLISRNSSSIKRKLDNFQKKLVDPINSGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALSKEIISFIISIQLILLLFLQWPVGSWISRKERLFGLKFSLINFTFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASIIWLSISCCCFIA FTILFKRLF
Sequences:
>Translated_409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYSKSIFINDIFCMLVITYLISRNSSSIKRKLDNFQKKLVDPINSGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALSKEIISFIISIQLILLLFLQWPVGSWISRKERLFGLKFSLINFTFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASIIWLSISCCCFIA FTILFKRLF >Mature_409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYSKSIFINDIFCMLVITYLISRNSSSIKRKLDNFQKKLVDPINSGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALSKEIISFIISIQLILLLFLQWPVGSWISRKERLFGLKFSLINFTFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASIIWLSISCCCFIA FTILFKRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45575; Mature: 45575
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGF CCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCH TISAIIGTVTRLFTGNYLNKTGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGA HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH AAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLGVFLGGYMTNFLYSKSIFIND HHHHCCCHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFCMLVITYLISRNSSSIKRKLDNFQKKLVDPINSGQLKWNKNSTIIILSILLITTSLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHHHHHHH IQVTLPLDLVKGGVYRNALSKEIISFIISIQLILLLFLQWPVGSWISRKERLFGLKFSLI HEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NFTFASFLLFISSYLNIPAFYLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALAL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH LSQCFAMGYFFGPFISGRILDLFGYASIIWLSISCCCFIAFTILFKRLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGF CCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCH TISAIIGTVTRLFTGNYLNKTGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGA HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH AAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLGVFLGGYMTNFLYSKSIFIND HHHHCCCHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFCMLVITYLISRNSSSIKRKLDNFQKKLVDPINSGQLKWNKNSTIIILSILLITTSLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHHHHHHH IQVTLPLDLVKGGVYRNALSKEIISFIISIQLILLLFLQWPVGSWISRKERLFGLKFSLI HEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NFTFASFLLFISSYLNIPAFYLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALAL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH LSQCFAMGYFFGPFISGRILDLFGYASIIWLSISCCCFIAFTILFKRLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA