Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696488
Identifier: 126696488
GI number: 126696488
Start: 963338
End: 964207
Strand: Reverse
Name: 126696488
Synonym: P9301_11501
Alternate gene names: NA
Gene position: 964207-963338 (Counterclockwise)
Preceding gene: 126696490
Following gene: 126696487
Centisome position: 58.73
GC content: 32.53
Gene sequence:
>870_bases ATGGTTGTTGAAAAGAATAATAAAGTTGAAGACTATAAATTTAAAAAAGGAAATTTAAATTTTGCTGTTGTTGGTCATGT TGAGTGGATAAATTTCTTAAAGGTCGATCAATTACCAAAAACAGGCGTCATTTCTCATTCTGAAAAATCTCTTGAGTATC CAGCTGGTGGCGGCTCTATTATCGCGAAAATACTTTCTGATTTAACTTTAAACCAAATTCATTTTTTTACGGCATTAGGT AATGATGAATATGGAGATAAGTGTTTCAAGATTCTCTCAAATATGGGAATTAAGATGCATGTAGCTTGGCGTGATAAACC AACTAGAAGAGGATTTAGTTTAATTGACTCTCAAGGTGAAAGAGCAATAACAGTTATTGGTGAAAGGTTAGCTCCAACTC ATAAAGACAAGTTGGAATGGAATATTTTAAAAAAAATGGACGGAATTTTTATTACGGCATCTGATTCAGAGATTTTTAAA ATGGCTAGAGCAGCTTCAATACTATGTACAACACCAAGGGTAGGATTAAATACAATTAATAATTCAAATGTTCTTTTAGA TGGATTAATTGGCAGTAATCTTGATCCAGGAGAAGTTTTTTCATTTTCTGAATTATCGTTAAAACCAAAATATACTATTA AAACCGAGGGAGAGAAGGGAGGCATAATATTCCCAGGAGGAAGATATAAGGCTCTTAAAAACAAAAAATTAAAGGTTGAT TCTTATGGATGTGGCGATTCATTTGCTGCTGGGATTCTTTATGGAATGGCATCTAAATGGGATATAGATAAAAGTTTAAA TCTTGCTAAAGTAATGGGAAGAGACGCAAGTGAATTTTTCGGCCCATATGCAAATAGTGATGAAAAATAA
Upstream 100 bases:
>100_bases AAAAGGTAAAGATAAGATAGTATCTGTTTATTATCTTTTAAAATGTTAAATGAATTCACTTGTCAAAAATATTTCATTTA ATAATAGTATTTAAAAGCTT
Downstream 100 bases:
>100_bases TTGAATTAAGACTTATATGAGCAATCTAGATAATAAAAATAAAAATCTACTTGTAGAAAACATTATTGTTTTCTTTTTAT TTACTGTTTTTTTAGTTTTT
Product: putative pfkB family carbohydrate kinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: Ribokinase Family Sugar Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MVVEKNNKVEDYKFKKGNLNFAVVGHVEWINFLKVDQLPKTGVISHSEKSLEYPAGGGSIIAKILSDLTLNQIHFFTALG NDEYGDKCFKILSNMGIKMHVAWRDKPTRRGFSLIDSQGERAITVIGERLAPTHKDKLEWNILKKMDGIFITASDSEIFK MARAASILCTTPRVGLNTINNSNVLLDGLIGSNLDPGEVFSFSELSLKPKYTIKTEGEKGGIIFPGGRYKALKNKKLKVD SYGCGDSFAAGILYGMASKWDIDKSLNLAKVMGRDASEFFGPYANSDEK
Sequences:
>Translated_289_residues MVVEKNNKVEDYKFKKGNLNFAVVGHVEWINFLKVDQLPKTGVISHSEKSLEYPAGGGSIIAKILSDLTLNQIHFFTALG NDEYGDKCFKILSNMGIKMHVAWRDKPTRRGFSLIDSQGERAITVIGERLAPTHKDKLEWNILKKMDGIFITASDSEIFK MARAASILCTTPRVGLNTINNSNVLLDGLIGSNLDPGEVFSFSELSLKPKYTIKTEGEKGGIIFPGGRYKALKNKKLKVD SYGCGDSFAAGILYGMASKWDIDKSLNLAKVMGRDASEFFGPYANSDEK >Mature_289_residues MVVEKNNKVEDYKFKKGNLNFAVVGHVEWINFLKVDQLPKTGVISHSEKSLEYPAGGGSIIAKILSDLTLNQIHFFTALG NDEYGDKCFKILSNMGIKMHVAWRDKPTRRGFSLIDSQGERAITVIGERLAPTHKDKLEWNILKKMDGIFITASDSEIFK MARAASILCTTPRVGLNTINNSNVLLDGLIGSNLDPGEVFSFSELSLKPKYTIKTEGEKGGIIFPGGRYKALKNKKLKVD SYGCGDSFAAGILYGMASKWDIDKSLNLAKVMGRDASEFFGPYANSDEK
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15
Molecular weight: Translated: 31942; Mature: 31942
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVEKNNKVEDYKFKKGNLNFAVVGHVEWINFLKVDQLPKTGVISHSEKSLEYPAGGGSI CEECCCCCCCCEEEECCCCCEEEEEEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHH IAKILSDLTLNQIHFFTALGNDEYGDKCFKILSNMGIKMHVAWRDKPTRRGFSLIDSQGE HHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCC RAITVIGERLAPTHKDKLEWNILKKMDGIFITASDSEIFKMARAASILCTTPRVGLNTIN EEEEEEEHHCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCEEEECCCCCCCEEEC NSNVLLDGLIGSNLDPGEVFSFSELSLKPKYTIKTEGEKGGIIFPGGRYKALKNKKLKVD CCCEEEEECCCCCCCCCCEEEEHHCCCCCCEEEEECCCCCCEEECCCCEECCCCCEEEEE SYGCGDSFAAGILYGMASKWDIDKSLNLAKVMGRDASEFFGPYANSDEK CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MVVEKNNKVEDYKFKKGNLNFAVVGHVEWINFLKVDQLPKTGVISHSEKSLEYPAGGGSI CEECCCCCCCCEEEECCCCCEEEEEEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHH IAKILSDLTLNQIHFFTALGNDEYGDKCFKILSNMGIKMHVAWRDKPTRRGFSLIDSQGE HHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCC RAITVIGERLAPTHKDKLEWNILKKMDGIFITASDSEIFKMARAASILCTTPRVGLNTIN EEEEEEEHHCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCEEEECCCCCCCEEEC NSNVLLDGLIGSNLDPGEVFSFSELSLKPKYTIKTEGEKGGIIFPGGRYKALKNKKLKVD CCCEEEEECCCCCCCCCCEEEEHHCCCCCCEEEEECCCCCCEEECCCCEECCCCCEEEEE SYGCGDSFAAGILYGMASKWDIDKSLNLAKVMGRDASEFFGPYANSDEK CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA