Click here to switch to the map view.

The map label for this gene is 126696288

Identifier: 126696288

GI number: 126696288

Start: 818055

End: 818312

Strand: Reverse

Name: 126696288

Synonym: P9301_09501

Alternate gene names: NA

Gene position: 818312-818055 (Counterclockwise)

Preceding gene: 126696289

Following gene: 126696287

Centisome position: 49.84

GC content: 31.4

Gene sequence:

>258_bases
TTGAAAACATCCGAATTAAGGACATTGGCAACTATTGCGATCAAAAAAAAGATACTTCAATCAGATCTTATACTTCTTCG
AGGTTCAGGTGCCTATGATCATATTAAAGAATTATTAGAAAAGAAATTCATCGTCAAACGGAAGCAAAAAGATGGGAGAT
CATATTGGCTATCATTATCAGAAAAGTTTTTTCAAACTTTTGCTGTAAGTAATGAATATCTCTCAAATATAGGAAGCGGT
AATAATAAGCAGCAATAA

Upstream 100 bases:

>100_bases
TCCCAACTCAGCTATTGAATTAAATGCAGTTAATAACAGTTTTTCTCTAGAACTAAAATCTAGTCTTAATGAATTCGTCG
ATGATTTACTTCCTTCTGAT

Downstream 100 bases:

>100_bases
TAAGTAAATGTTAGGATGTATTAAATTACGAAAAGATAATGGTATCTGAGATTTTTGCAGTTCTGGGTCAAACTTTATCA
ATTTATTCTTTCATATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Segregation And Condensation Protein B; Condensin Subunit ScpB; Transcription Regulator

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKTSELRTLATIAIKKKILQSDLILLRGSGAYDHIKELLEKKFIVKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSNIGSG
NNKQQ

Sequences:

>Translated_85_residues
MKTSELRTLATIAIKKKILQSDLILLRGSGAYDHIKELLEKKFIVKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSNIGSG
NNKQQ
>Mature_85_residues
MKTSELRTLATIAIKKKILQSDLILLRGSGAYDHIKELLEKKFIVKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSNIGSG
NNKQQ

Specific function: Unknown

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9795; Mature: 9795

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSELRTLATIAIKKKILQSDLILLRGSGAYDHIKELLEKKFIVKRKQKDGRSYWLSLS
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EKFFQTFAVSNEYLSNIGSGNNKQQ
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTSELRTLATIAIKKKILQSDLILLRGSGAYDHIKELLEKKFIVKRKQKDGRSYWLSLS
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EKFFQTFAVSNEYLSNIGSGNNKQQ
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA