Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696258
Identifier: 126696258
GI number: 126696258
Start: 792775
End: 793242
Strand: Reverse
Name: 126696258
Synonym: P9301_09201
Alternate gene names: NA
Gene position: 793242-792775 (Counterclockwise)
Preceding gene: 126696259
Following gene: 126696256
Centisome position: 48.31
GC content: 25.21
Gene sequence:
>468_bases ATGGAATTTATATTATTTTTGAGCAAATTAGATAAAGAGATTCTTAACTTATTAAATAAAGCAAACTACATAGTTGAAGA AAATAAAATTGAATGTCTATTAAACAAGGAAATAAAAGGGCTACATAATTTTAAAGAAAATAAAATAATAATATGTACTG AAAACGCAAAAAGGAAAACAAATTATAGAAATAAGAATCAACAACCAAATAAAGATAACTTCAAAACAGAAAGGGCGGTA AGAAAAGCATTAAGACACGAAGCAACTCATGCGATACAAAAATGTAATAACAATAAAACAATAGGAGATATAAAAAAATT AGAAAGCAAATTGCATCAAAATAAAAGAAAAGCATTAGAGTTCTCTAGTTCAAATTTTTCTGGGACTTATGCGAAAGAAG TAGAAGCTTATGTTCTTGAAGATAAACCCAAAAAAGTTAAAAACTTGATTAAAAAATACTGCCTATAA
Upstream 100 bases:
>100_bases AAAAATCCACAAAGTTGGAAGATGAATAAGAATTTCTTAAGTCGCTCATCTACAACTGATATAGAACAAATCCCAACTAT AATGAAGTAAACAAAATAGA
Downstream 100 bases:
>100_bases ATTAAAAATTTTTATATTAACTAGCGATGAAATTGCCACAACGTTGTTTATCTAAAAAATTAATATGTTGCCTTTCTAAG TAATATAATTCCTGAAATTT
Product: Serine hydroxymethyltransferase
Products: NA
Alternate protein names: Serine Hydroxymethyltransferase-Like
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MEFILFLSKLDKEILNLLNKANYIVEENKIECLLNKEIKGLHNFKENKIIICTENAKRKTNYRNKNQQPNKDNFKTERAV RKALRHEATHAIQKCNNNKTIGDIKKLESKLHQNKRKALEFSSSNFSGTYAKEVEAYVLEDKPKKVKNLIKKYCL
Sequences:
>Translated_155_residues MEFILFLSKLDKEILNLLNKANYIVEENKIECLLNKEIKGLHNFKENKIIICTENAKRKTNYRNKNQQPNKDNFKTERAV RKALRHEATHAIQKCNNNKTIGDIKKLESKLHQNKRKALEFSSSNFSGTYAKEVEAYVLEDKPKKVKNLIKKYCL >Mature_155_residues MEFILFLSKLDKEILNLLNKANYIVEENKIECLLNKEIKGLHNFKENKIIICTENAKRKTNYRNKNQQPNKDNFKTERAV RKALRHEATHAIQKCNNNKTIGDIKKLESKLHQNKRKALEFSSSNFSGTYAKEVEAYVLEDKPKKVKNLIKKYCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18211; Mature: 18211
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFILFLSKLDKEILNLLNKANYIVEENKIECLLNKEIKGLHNFKENKIIICTENAKRKT CHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH NYRNKNQQPNKDNFKTERAVRKALRHEATHAIQKCNNNKTIGDIKKLESKLHQNKRKALE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FSSSNFSGTYAKEVEAYVLEDKPKKVKNLIKKYCL CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MEFILFLSKLDKEILNLLNKANYIVEENKIECLLNKEIKGLHNFKENKIIICTENAKRKT CHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH NYRNKNQQPNKDNFKTERAVRKALRHEATHAIQKCNNNKTIGDIKKLESKLHQNKRKALE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FSSSNFSGTYAKEVEAYVLEDKPKKVKNLIKKYCL CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA