Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696255

Identifier: 126696255

GI number: 126696255

Start: 789356

End: 789718

Strand: Reverse

Name: 126696255

Synonym: P9301_09171

Alternate gene names: NA

Gene position: 789718-789356 (Counterclockwise)

Preceding gene: 126696256

Following gene: 126696254

Centisome position: 48.1

GC content: 39.39

Gene sequence:

>363_bases
ATGATAATGAAATTTCACTATTTGGCTTTATTATTTTGTTTTTCTCCTATTGCTCAAGTTAATGCAACAACCCCAAAATC
AGTAACTTGTACAAGAACCGAATATAGAGAAGAGTACATTCCTGGAACGAAATCAAACCCAGGATACGTTAAAAGTTATG
AGGTAGACGTTGTAATACCCTGTGGAGGTCAAAACAAAGCTGAAAAAATAGATGATAATGATTGTAGTGAAGGTTCTGTT
ATAGGGGGTATTCTTGGTGCTGGAATTGCATTATCCTCATCTAGAGGGAAAGACAGGTTTTGGGCCGTACCAGCGGGCGG
TACTGCAGGAGCTCTAATTGGATGTCAGGTGGATGGTGGTTAA

Upstream 100 bases:

>100_bases
AACATAAATTTTTTATTAGGCGCCTCACTAGTTTTATTAGGAACTATTATATCTACTACCAAAATAATCAAAAGGACATA
GAATATTATTAGATAAAAAA

Downstream 100 bases:

>100_bases
TTGATTAGTTGGATAAATGGAGATTTAGTTGATTTATGGCAAACTAATCAAAAATTTTTTGTTTTAATAAATTGTCAAGG
ATTAGGATACGAAATACAAA

Product: cAMP phosphodiesterases class-II

Products: NA

Alternate protein names: CAMP Phosphodiesterase Class-II-Like; CAMP Phosphodiesterases Class-II

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG

Sequences:

>Translated_120_residues
MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
>Mature_120_residues
MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12639; Mature: 12639

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP
CEEHHHHHHHHHHHCCHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
CGGQNKAEKIDDNDCSEGSVIGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
CCCCCCCCCCCCCCCCCCCEEEHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP
CEEHHHHHHHHHHHCCHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
CGGQNKAEKIDDNDCSEGSVIGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
CCCCCCCCCCCCCCCCCCCEEEHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA