Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696255
Identifier: 126696255
GI number: 126696255
Start: 789356
End: 789718
Strand: Reverse
Name: 126696255
Synonym: P9301_09171
Alternate gene names: NA
Gene position: 789718-789356 (Counterclockwise)
Preceding gene: 126696256
Following gene: 126696254
Centisome position: 48.1
GC content: 39.39
Gene sequence:
>363_bases ATGATAATGAAATTTCACTATTTGGCTTTATTATTTTGTTTTTCTCCTATTGCTCAAGTTAATGCAACAACCCCAAAATC AGTAACTTGTACAAGAACCGAATATAGAGAAGAGTACATTCCTGGAACGAAATCAAACCCAGGATACGTTAAAAGTTATG AGGTAGACGTTGTAATACCCTGTGGAGGTCAAAACAAAGCTGAAAAAATAGATGATAATGATTGTAGTGAAGGTTCTGTT ATAGGGGGTATTCTTGGTGCTGGAATTGCATTATCCTCATCTAGAGGGAAAGACAGGTTTTGGGCCGTACCAGCGGGCGG TACTGCAGGAGCTCTAATTGGATGTCAGGTGGATGGTGGTTAA
Upstream 100 bases:
>100_bases AACATAAATTTTTTATTAGGCGCCTCACTAGTTTTATTAGGAACTATTATATCTACTACCAAAATAATCAAAAGGACATA GAATATTATTAGATAAAAAA
Downstream 100 bases:
>100_bases TTGATTAGTTGGATAAATGGAGATTTAGTTGATTTATGGCAAACTAATCAAAAATTTTTTGTTTTAATAAATTGTCAAGG ATTAGGATACGAAATACAAA
Product: cAMP phosphodiesterases class-II
Products: NA
Alternate protein names: CAMP Phosphodiesterase Class-II-Like; CAMP Phosphodiesterases Class-II
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
Sequences:
>Translated_120_residues MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG >Mature_120_residues MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV IGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12639; Mature: 12639
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP CEEHHHHHHHHHHHCCHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE CGGQNKAEKIDDNDCSEGSVIGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG CCCCCCCCCCCCCCCCCCCEEEHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MIMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP CEEHHHHHHHHHHHCCHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE CGGQNKAEKIDDNDCSEGSVIGGILGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG CCCCCCCCCCCCCCCCCCCEEEHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA