Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is pilT [H]

Identifier: 126696028

GI number: 126696028

Start: 612807

End: 613880

Strand: Reverse

Name: pilT [H]

Synonym: P9301_06901

Alternate gene names: 126696028

Gene position: 613880-612807 (Counterclockwise)

Preceding gene: 126696029

Following gene: 126696027

Centisome position: 37.39

GC content: 33.71

Gene sequence:

>1074_bases
ATGAAATTAACTAATCTCATGTCAGAGTTAGTAAAAAGAAATGGTTCTGACCTGCATTTAACAGGAGACAGCTATCCTTT
TTTTAGAATTCAAGGACAAATTTTACCAGCATCAAGCGAACAATATACAAGTAAAGAATTGAGAGCAGATCTTACTCAAA
TTTTAGGCAATGAAAAGCTTGCAAAATTTGATAAGGAAAAAGAACTCGATTGTAGTTATGGCTTAGAGGGGATTGCGAGA
TTTAGGATGAACATATTTATAGACAGGGGTAAGATTTCATGTGTTATGAGAGCACTCAATACTGAAATTCCAAGTTTTTC
AAAAATAGGTCTCCCTGATAGTGTTCAACAACTTTTAAGTAGACCAAGAGGTTTAATGCTTGTAACTGGTCCAACTGGAT
CTGGGAAAACGACGACACTAGCAAGTGGGATTGACTGGATTAATACAAATTTTGCACACCACATATTAACTATTGAAGAC
CCAATTGAATTCATCTATAACAATAAAAATTGTTTAGTAAGACAAAGAGAAGTTGGAGAAGATACTATTTCCTTTTCAAA
TGCATTAAGGTCAGCACTAAGAGAAGATCCTGATATTATATTAGTTGGTGAAATGAGGGATCTGGAGACAATAAGCTTAG
CCATTACTGCAGCAGAAACTGGCCATTTAGTATTAGGGACTTTACACACGGCATCAGCCTCTCAAACAATAGACAGAATA
ATTGATGTCTTCCCAACATCTCAGCAAATGCAAATTAGAGTTCAACTATCTTCATCTTTAATTGGTGTAATTTCGCAAAC
ATTATGTAAAACTATTGATAATAAAAGATGCCTAGCAGCAGAAATATTAGTTAACAATAATGCTATTGCTAATTTAATTA
GGGAAGCAAAAGCATCGCAAGTTTATTCTCAACTACAAATAGGAGGAAAATTTGGAATGCAAACTTTAGAACAATGTTTA
TCTGAACTTGTATCTAAAAGTGCAATTACCACTGACGAAGCCTTATATAAATGTAATAGGCCAAATGTTTTGAAAGGTTT
GCTTGAAGAAATTAATTCTGAGATGCCAACATAA

Upstream 100 bases:

>100_bases
GTTTACTAAAATATGGTATGGATTTAGTAAGAAATGAACTTACTACAATTGAAGAAGTTGAACGTGTTTGCTTACTCAAT
GACACTCAATCTGAAGAATT

Downstream 100 bases:

>100_bases
ATTGATATGAACTTAAATACTACAAAATAATTGTGGATTATAGATACATCGAAAACGCAAAATTAAGAAGGCTTATGCAA
AAAGCTAGGCATAAAAGAAA

Product: twitching motility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR
FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED
PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI
IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL
SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT

Sequences:

>Translated_357_residues
MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR
FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED
PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI
IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL
SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT
>Mature_357_residues
MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR
FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED
PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI
IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL
SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT

Specific function: May be involved in pilus retraction [H]

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=326, Percent_Identity=41.1042944785276, Blast_Score=251, Evalue=7e-68,
Organism=Escherichia coli, GI1786296, Length=282, Percent_Identity=34.3971631205674, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789723, Length=159, Percent_Identity=44.0251572327044, Blast_Score=121, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 39498; Mature: 39498

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKL
CCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHH
AKFDKEKELDCSYGLEGIARFRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLS
HHCCCCCCCCHHHCHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIEDPIEFIYNNKNCLVRQREVGE
CCCCEEEEECCCCCCCCEEHHCCCCHHCCCCEEEEEEECCCHHHHCCCCCCEEEHHHCCC
DTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHH
IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQ
HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH
VYSQLQIGGKFGMQTLEQCLSELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKL
CCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHH
AKFDKEKELDCSYGLEGIARFRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLS
HHCCCCCCCCHHHCHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIEDPIEFIYNNKNCLVRQREVGE
CCCCEEEEECCCCCCCCEEHHCCCCHHCCCCEEEEEEECCCHHHHCCCCCCEEEHHHCCC
DTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHH
IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQ
HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH
VYSQLQIGGKFGMQTLEQCLSELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1676385; 10984043 [H]