Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is pilT [H]
Identifier: 126696028
GI number: 126696028
Start: 612807
End: 613880
Strand: Reverse
Name: pilT [H]
Synonym: P9301_06901
Alternate gene names: 126696028
Gene position: 613880-612807 (Counterclockwise)
Preceding gene: 126696029
Following gene: 126696027
Centisome position: 37.39
GC content: 33.71
Gene sequence:
>1074_bases ATGAAATTAACTAATCTCATGTCAGAGTTAGTAAAAAGAAATGGTTCTGACCTGCATTTAACAGGAGACAGCTATCCTTT TTTTAGAATTCAAGGACAAATTTTACCAGCATCAAGCGAACAATATACAAGTAAAGAATTGAGAGCAGATCTTACTCAAA TTTTAGGCAATGAAAAGCTTGCAAAATTTGATAAGGAAAAAGAACTCGATTGTAGTTATGGCTTAGAGGGGATTGCGAGA TTTAGGATGAACATATTTATAGACAGGGGTAAGATTTCATGTGTTATGAGAGCACTCAATACTGAAATTCCAAGTTTTTC AAAAATAGGTCTCCCTGATAGTGTTCAACAACTTTTAAGTAGACCAAGAGGTTTAATGCTTGTAACTGGTCCAACTGGAT CTGGGAAAACGACGACACTAGCAAGTGGGATTGACTGGATTAATACAAATTTTGCACACCACATATTAACTATTGAAGAC CCAATTGAATTCATCTATAACAATAAAAATTGTTTAGTAAGACAAAGAGAAGTTGGAGAAGATACTATTTCCTTTTCAAA TGCATTAAGGTCAGCACTAAGAGAAGATCCTGATATTATATTAGTTGGTGAAATGAGGGATCTGGAGACAATAAGCTTAG CCATTACTGCAGCAGAAACTGGCCATTTAGTATTAGGGACTTTACACACGGCATCAGCCTCTCAAACAATAGACAGAATA ATTGATGTCTTCCCAACATCTCAGCAAATGCAAATTAGAGTTCAACTATCTTCATCTTTAATTGGTGTAATTTCGCAAAC ATTATGTAAAACTATTGATAATAAAAGATGCCTAGCAGCAGAAATATTAGTTAACAATAATGCTATTGCTAATTTAATTA GGGAAGCAAAAGCATCGCAAGTTTATTCTCAACTACAAATAGGAGGAAAATTTGGAATGCAAACTTTAGAACAATGTTTA TCTGAACTTGTATCTAAAAGTGCAATTACCACTGACGAAGCCTTATATAAATGTAATAGGCCAAATGTTTTGAAAGGTTT GCTTGAAGAAATTAATTCTGAGATGCCAACATAA
Upstream 100 bases:
>100_bases GTTTACTAAAATATGGTATGGATTTAGTAAGAAATGAACTTACTACAATTGAAGAAGTTGAACGTGTTTGCTTACTCAAT GACACTCAATCTGAAGAATT
Downstream 100 bases:
>100_bases ATTGATATGAACTTAAATACTACAAAATAATTGTGGATTATAGATACATCGAAAACGCAAAATTAAGAAGGCTTATGCAA AAAGCTAGGCATAAAAGAAA
Product: twitching motility protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT
Sequences:
>Translated_357_residues MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT >Mature_357_residues MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKLAKFDKEKELDCSYGLEGIAR FRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLSRPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIED PIEFIYNNKNCLVRQREVGEDTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQVYSQLQIGGKFGMQTLEQCL SELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT
Specific function: May be involved in pilus retraction [H]
COG id: COG2805
COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI87082188, Length=326, Percent_Identity=41.1042944785276, Blast_Score=251, Evalue=7e-68, Organism=Escherichia coli, GI1786296, Length=282, Percent_Identity=34.3971631205674, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789723, Length=159, Percent_Identity=44.0251572327044, Blast_Score=121, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR006321 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 39498; Mature: 39498
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKL CCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHH AKFDKEKELDCSYGLEGIARFRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLS HHCCCCCCCCHHHCHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH RPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIEDPIEFIYNNKNCLVRQREVGE CCCCEEEEECCCCCCCCEEHHCCCCHHCCCCEEEEEEECCCHHHHCCCCCCEEEHHHCCC DTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHH IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQ HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH VYSQLQIGGKFGMQTLEQCLSELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLTNLMSELVKRNGSDLHLTGDSYPFFRIQGQILPASSEQYTSKELRADLTQILGNEKL CCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHH AKFDKEKELDCSYGLEGIARFRMNIFIDRGKISCVMRALNTEIPSFSKIGLPDSVQQLLS HHCCCCCCCCHHHCHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH RPRGLMLVTGPTGSGKTTTLASGIDWINTNFAHHILTIEDPIEFIYNNKNCLVRQREVGE CCCCEEEEECCCCCCCCEEHHCCCCHHCCCCEEEEEEECCCHHHHCCCCCCEEEHHHCCC DTISFSNALRSALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTASASQTIDRI HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHH IDVFPTSQQMQIRVQLSSSLIGVISQTLCKTIDNKRCLAAEILVNNNAIANLIREAKASQ HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH VYSQLQIGGKFGMQTLEQCLSELVSKSAITTDEALYKCNRPNVLKGLLEEINSEMPT HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1676385; 10984043 [H]