Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126695984
Identifier: 126695984
GI number: 126695984
Start: 576040
End: 576762
Strand: Reverse
Name: 126695984
Synonym: P9301_06461
Alternate gene names: NA
Gene position: 576762-576040 (Counterclockwise)
Preceding gene: 126695986
Following gene: 126695977
Centisome position: 35.13
GC content: 29.18
Gene sequence:
>723_bases ATGACTTTTACAAAATATCAATTTAATAATTTTTGTTATTGGCCTTCAAATCCTAAAAAAATTGTAGAATTTATTGGTGG AAGTTATCTAGCTTCTAAACCAGATTTAACTTATAAAAGATTCATAGACAGTTTAATTAATAAAAACTATGCAGTACATG CTTATAAATACACTCCACAATTTGATCACCAACAACTTGCTATTAAAGCATGGAGGGATTTCAAGAATTGTCGAATATCT TTATCAAAAAGAATAGGAACATCAATTCCTTCAATAAGAATTGGTCATAGTCTAGGCTGCAAACTTCATCTAATTTCTCC TGATGGTGGAAGAAACTGCGAAAAATTCATATCAATAAGTTTTAACAACTTCAGTGCTAATAAATCCATTCCATTATTGA AACAAATTTCTCGAAAATTAGAATTCAACAGTGAATTCAGCCCAAGCCCTGAAAGAACTCTGCGATTAATTGAAAAAACA TATAATCAAAAAAATAACTTCCTCATAAAATTTAACTCAGATGAATTAGATCAAACAGATAAATTATTTTCTTGTCTGAA AGCAAGAAAAGAAGATAATTCAAAGGGAGTAATGTTAAAAGGTACACACACTATTATTGCAAGCGCAGGACTAAGGGAAA ATTTTTTGGGAGACTGGGCCGATGATGAATTCAAAAGAAATACTATAAAAAAAATTTCCAATTTAATTGATGAATCTGAT TAG
Upstream 100 bases:
>100_bases TATTTATCTTGACGCATTTAATAAAAATTTCTCTTAAATTAATATAAATTAAGAAACATGATTAGAAAATAATTTTTGAA ACATTCTTTGTTTATGAAAG
Downstream 100 bases:
>100_bases GATAATTCTTTCAGCTTTTCCAAAACAGAACTATCTTCAAGAGTGCTTATATCACCGCTAATTTTTTCTCCACCAGCTAA AGATCTTAAAATTCGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTFTKYQFNNFCYWPSNPKKIVEFIGGSYLASKPDLTYKRFIDSLINKNYAVHAYKYTPQFDHQQLAIKAWRDFKNCRIS LSKRIGTSIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISRKLEFNSEFSPSPERTLRLIEKT YNQKNNFLIKFNSDELDQTDKLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESD
Sequences:
>Translated_240_residues MTFTKYQFNNFCYWPSNPKKIVEFIGGSYLASKPDLTYKRFIDSLINKNYAVHAYKYTPQFDHQQLAIKAWRDFKNCRIS LSKRIGTSIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISRKLEFNSEFSPSPERTLRLIEKT YNQKNNFLIKFNSDELDQTDKLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESD >Mature_239_residues TFTKYQFNNFCYWPSNPKKIVEFIGGSYLASKPDLTYKRFIDSLINKNYAVHAYKYTPQFDHQQLAIKAWRDFKNCRISL SKRIGTSIPSIRIGHSLGCKLHLISPDGGRNCEKFISISFNNFSANKSIPLLKQISRKLEFNSEFSPSPERTLRLIEKTY NQKNNFLIKFNSDELDQTDKLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27729; Mature: 27598
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTKYQFNNFCYWPSNPKKIVEFIGGSYLASKPDLTYKRFIDSLINKNYAVHAYKYTPQ CCCEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCC FDHQQLAIKAWRDFKNCRISLSKRIGTSIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS CCHHHHHHHHHHHHHHHHEEHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE FNNFSANKSIPLLKQISRKLEFNSEFSPSPERTLRLIEKTYNQKNNFLIKFNSDELDQTD ECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH KLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESD HHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TFTKYQFNNFCYWPSNPKKIVEFIGGSYLASKPDLTYKRFIDSLINKNYAVHAYKYTPQ CCEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCC FDHQQLAIKAWRDFKNCRISLSKRIGTSIPSIRIGHSLGCKLHLISPDGGRNCEKFISIS CCHHHHHHHHHHHHHHHHEEHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEE FNNFSANKSIPLLKQISRKLEFNSEFSPSPERTLRLIEKTYNQKNNFLIKFNSDELDQTD ECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH KLFSCLKARKEDNSKGVMLKGTHTIIASAGLRENFLGDWADDEFKRNTIKKISNLIDESD HHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA