Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is thrB
Identifier: 126695959
GI number: 126695959
Start: 548622
End: 549569
Strand: Reverse
Name: thrB
Synonym: P9301_06211
Alternate gene names: 126695959
Gene position: 549569-548622 (Counterclockwise)
Preceding gene: 126695960
Following gene: 126695958
Centisome position: 33.47
GC content: 40.4
Gene sequence:
>948_bases ATGTCTATTCCTGAAGTAGGTAAAAAAATAAGGGTAACAGTGCCTTCCACAACTGCCAATTTAGGGCCTGGATTCGATTG TCTTGGAGCAGCATTAGATTTATATAATGAATTTATTTTTACAAGAATTGAAGGTGGTGGAGATAGATTTGATTTAATAA TGGAAAGTACAGATGGTAATCATTTAAGAGGAGGACCTGAAAACTTAGTTTTTAGAGCAGCTCAGAAAGTGTGGGAGAGC GCAAATATGGATCCTTTTGCACTTGAAGCAAGGGTTAAGTTAGCAGTGCCCCCTGCACGCGGACTTGGTAGTAGTGCTAC AGCAATAGTTGCTGGACTAATCGGAGCAAATGCAATAATGAACTCTCCGTTGTCCAAAGAAAAACTCCTTGAACTTGCCA TTGATATAGAAGGTCATCCTGATAATGTAGTGCCCTCTCTGCTTGGTGGGCTATGTTTAACAGCCAGGTCTTCTTCTCAA AGATGGAGAATCATTAGATGTGAATGGCACTACTCAATTAAAGCTGTTGTAGCAATACCTGCAATTCGTCTAAGCACAAG TGAAGCAAGAAAGGTTATGCCTAGGAATGTACCTATATCTGATGCAGTGACAAATATGGGGGCACTCACTTTGTTACTAA ATGGATTAAAGACAGGAAATGAGGAACTCATAAAAGAGGGAATGTTTGATAAGTTACATGAACCGTATAGATGGAAACTT ATTAAAGGCGGACTAGAAGTCAAAGATGCCGCACTAAATGCAGGTGCTCTAGGATGCGCAATTAGTGGAGCTGGACCAAG TATCTTAGCTTTGTGTAAAAAAGAAAATGGTAAAAACGTCAGTCAAGCCATGGTTAAGGCATGGGAAATGTCAGGTGTAG CTAGCAGAGCACCATTCTTAAACGTTCAAACTACAGGCAGCCAATTTAGCACTATCTCTGGTAAGTAG
Upstream 100 bases:
>100_bases TCTTAAAACAATACCTATAAAAGTAATTTTAGATGAAGAGTTTGGACTTTTTAGTGCAGCCTGCAGAGCAAAAATGCTTT TAAAAACTTAAAAACAAAAA
Downstream 100 bases:
>100_bases TTTTACTTAGGCATTTTTAATGTTATAGTCTCAAGCTAGTACAACTTCAACTAGAATAAAAAAATTATTCATTCCATAAA TGAATTTAGAATCTTTTCCC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSIPEVGKKIRVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWES ANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQ RWRIIRCEWHYSIKAVVAIPAIRLSTSEARKVMPRNVPISDAVTNMGALTLLLNGLKTGNEELIKEGMFDKLHEPYRWKL IKGGLEVKDAALNAGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEMSGVASRAPFLNVQTTGSQFSTISGK
Sequences:
>Translated_315_residues MSIPEVGKKIRVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWES ANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQ RWRIIRCEWHYSIKAVVAIPAIRLSTSEARKVMPRNVPISDAVTNMGALTLLLNGLKTGNEELIKEGMFDKLHEPYRWKL IKGGLEVKDAALNAGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEMSGVASRAPFLNVQTTGSQFSTISGK >Mature_314_residues SIPEVGKKIRVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWESA NMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQR WRIIRCEWHYSIKAVVAIPAIRLSTSEARKVMPRNVPISDAVTNMGALTLLLNGLKTGNEELIKEGMFDKLHEPYRWKLI KGGLEVKDAALNAGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEMSGVASRAPFLNVQTTGSQFSTISGK
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily
Homologues:
Organism=Escherichia coli, GI1786184, Length=293, Percent_Identity=30.3754266211604, Blast_Score=114, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321814, Length=338, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_PROM0 (A3PBW9)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090845.1 - ProteinModelPortal: A3PBW9 - SMR: A3PBW9 - STRING: A3PBW9 - GeneID: 4911327 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_06211 - eggNOG: COG0083 - HOGENOM: HBG646290 - OMA: FDCLGAA - ProtClustDB: PRK01212 - BioCyc: PMAR167546:P9301ORF_0636-MONOMER - GO: GO:0005737 - HAMAP: MF_00384 - InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF000676 - PRINTS: PR00958 - TIGRFAMs: TIGR00191
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =2.7.1.39
Molecular weight: Translated: 33579; Mature: 33448
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPEVGKKIRVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGN CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCC HLRGGPENLVFRAAQKVWESANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIM CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH NSPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQRWRIIRCEWHYSIKAVVAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECCCEEEEEEEC AIRLSTSEARKVMPRNVPISDAVTNMGALTLLLNGLKTGNEELIKEGMFDKLHEPYRWKL EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE IKGGLEVKDAALNAGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEMSGVASRAPFL EECCCEEEHHHCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE NVQTTGSQFSTISGK EEEECCCCCCCCCCC >Mature Secondary Structure SIPEVGKKIRVTVPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCC HLRGGPENLVFRAAQKVWESANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIM CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH NSPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTARSSSQRWRIIRCEWHYSIKAVVAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECCCEEEEEEEC AIRLSTSEARKVMPRNVPISDAVTNMGALTLLLNGLKTGNEELIKEGMFDKLHEPYRWKL EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE IKGGLEVKDAALNAGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEMSGVASRAPFL EECCCEEEHHHCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE NVQTTGSQFSTISGK EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA