Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695939
Identifier: 126695939
GI number: 126695939
Start: 525193
End: 525513
Strand: Reverse
Name: 126695939
Synonym: P9301_06011
Alternate gene names: NA
Gene position: 525513-525193 (Counterclockwise)
Preceding gene: 126695940
Following gene: 126695937
Centisome position: 32.01
GC content: 27.73
Gene sequence:
>321_bases ATGAGTAAATTATCTCAACAGGAAGAAAGAGAACTTATCTCCTTTATTAAGGATTGGTTGAAATCTCATGGATTTAATCA AAAAGATTTAGCAAATGAATTAAATATTAAATCGAGCAGAACCTCTGAGATTATTCTTAAGATTAAAGAATTACATAAAA AAGGCGGTATGTTCAATATTGCAAAAAATCTCATAAGGATTGAACAAAATTGGTTAAACAATTTCAAAAATGATTATCCA GAGAAAAAGCAAAAATCACCATATAATCAATTAGATCTCGACTCATTAGTAAATCAGATAACTCACGACACTTGTGAATA A
Upstream 100 bases:
>100_bases TGCCCTCACAGCCGTACTTAGTATATGGAGCAAATATATGACTCCTTCAATTAGAGCGAGAGCAGAGACCAAGCTTAATA AGTTATTCCCTTTTTATTAA
Downstream 100 bases:
>100_bases ATATTATTTAAAATATTATTTTTTAGTTAAAATAATAAATCACATATAAAAAATAACCTTTAAATAAATATCGTTTTAAT TCCTAAATATGATAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSKLSQQEERELISFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELHKKGGMFNIAKNLIRIEQNWLNNFKNDYP EKKQKSPYNQLDLDSLVNQITHDTCE
Sequences:
>Translated_106_residues MSKLSQQEERELISFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELHKKGGMFNIAKNLIRIEQNWLNNFKNDYP EKKQKSPYNQLDLDSLVNQITHDTCE >Mature_105_residues SKLSQQEERELISFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELHKKGGMFNIAKNLIRIEQNWLNNFKNDYPE KKQKSPYNQLDLDSLVNQITHDTCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12533; Mature: 12402
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSQQEERELISFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELHKKGGMFNI CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH AKNLIRIEQNWLNNFKNDYPEKKQKSPYNQLDLDSLVNQITHDTCE HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SKLSQQEERELISFIKDWLKSHGFNQKDLANELNIKSSRTSEIILKIKELHKKGGMFNI CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH AKNLIRIEQNWLNNFKNDYPEKKQKSPYNQLDLDSLVNQITHDTCE HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA