Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695937
Identifier: 126695937
GI number: 126695937
Start: 524273
End: 524629
Strand: Reverse
Name: 126695937
Synonym: P9301_05991
Alternate gene names: NA
Gene position: 524629-524273 (Counterclockwise)
Preceding gene: 126695939
Following gene: 126695932
Centisome position: 31.95
GC content: 36.69
Gene sequence:
>357_bases ATGCTAACTGGAAGCGATCTCCTTGCAAAAGTTAAAGAACTTGGTGATGTTAGCAAATCTGACCTAGTTCGCGCCTGTGG ATACGTTTCCACTAAGAAAAATGGAGGTGAACGTCTAAATTTTACAGCATTTTATGAAGCACTTCTAGAAGCAAAAGGAG TCAATCTTGGTGAATCTGGAGTTGCAGGTATTGGGAAAGGAGGAAGAAAGCTAAGTTATATTGCAACAGTTCAAGGAAAC GGAAATCTTTTGATTGGGAAAGCATATACAGCACTTTTAGATTTAAAGGCTGGTGATGAATTTGAAATTAAGCTTGGAAA AAAACAAATCAGATTATTACCTACAGAAGAATCTTAA
Upstream 100 bases:
>100_bases CATTTTTAAAGATAAATAATAGAGTAAAAACATAATTAATAATTGCATATATTACATACAAATTGCTATGTTATTTAATA CAACTTTCTTTTAATTAATT
Downstream 100 bases:
>100_bases AGACAGCAAAAATAATTTGGATATATCATTTTTAATTAGTTTTCTATAATTTGGTTTTTTAATAAATAAACTATCTTTGT ATTTATTTTTTTTGATCTGC
Product: transcriptional regulator AbrB
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGESGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGKKQIRLLPTEES
Sequences:
>Translated_118_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGESGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGKKQIRLLPTEES >Mature_118_residues MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGESGVAGIGKGGRKLSYIATVQGN GNLLIGKAYTALLDLKAGDEFEIKLGKKQIRLLPTEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12493; Mature: 12493
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGESG CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCC VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGKKQIRLLPTEES CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCCCC >Mature Secondary Structure MLTGSDLLAKVKELGDVSKSDLVRACGYVSTKKNGGERLNFTAFYEALLEAKGVNLGESG CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCC VAGIGKGGRKLSYIATVQGNGNLLIGKAYTALLDLKAGDEFEIKLGKKQIRLLPTEES CCCCCCCCCEEEEEEEEECCCCEEEEEHEEEEEECCCCCEEEEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA