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The map label for this gene is ldcA [C]

Identifier: 126695818

GI number: 126695818

Start: 419759

End: 420628

Strand: Reverse

Name: ldcA [C]

Synonym: P9301_04801

Alternate gene names: 126695818

Gene position: 420628-419759 (Counterclockwise)

Preceding gene: 126695819

Following gene: 126695816

Centisome position: 25.62

GC content: 33.22

Gene sequence:

>870_bases
ATGTTTTTTAGATTAAAAAAAGGAGATCTAATAGATATTTTAGCTCCGGGCTCCTTTATTGATGAAGACGAAAATTTTCA
AAAAGGTATAGAAATCTTAAAAAACTGGGGCTTAGAAATTAATGAAAATAATTCTCTATCAAAAAAATTTGGTTATTTTG
CTGGTGATGATTTAACTAGATTCGAAGAACTGGAAAAAGCACAAAATAGTAAGCTAATCATTTTTGCAAAAGGTGGGTGG
GGTTCATCAAGACTATTAGAAAAAAACCCTTCTTGGCAACATGGTTTAATGCTTGGATTCTCAGATACATGTTCTTTACT
ACTATCTAAATATTCTCAAGGATTTATAGGTTCTATTCATGGTCCCATGGTTACTGGCCTTTTCAAAGAGCCAGAGTGGA
GTCTTGAAAGATTAAGAAATTTACTTTTTGAGGGATATGTTGCGGACATACGAGGAATTCCTTTAAGAGGTGGGAAAGCT
AAAGGAGAAATTATAGTTTCTAACTTAACTATTGCTACTTTTTTAATTGGTACTGATCACTTTCCAGATTGCAAAGGGAA
AATAATAATTTTTGAAGATATTAATGAAGATATTTATAAAATTGATCGCATGTTGACTTACCTCAGAATGACTAAAACAC
TTACTGAAATTGCTGGCATTGGATTCGGAAGTTTTTCTAATGATTCCAGCGACCTTGAATGGAAAGATTTACTAAAAAAC
TGCATTATTGAAAGACTCCAAGAGTTTGACTTTCCTATTCTTTTTGACCTCCCAATAGGCCACAGATCGGGAAATGCTTG
CATTCCTTTAGGATACGAAGCCACCTTAAATGGTGATGATGGCATTCTTAGTATCGATTCACCTTTTTAA

Upstream 100 bases:

>100_bases
AAAGCAATCAATAAAAAATATTGGGAATCACTTCAAAAATCAATCAATTTATGGAGGGGTCCTTTTATTAGGAATTATTA
TTGCCTCATAAATTCTAAAT

Downstream 100 bases:

>100_bases
CTAGGGGTTCTTCACAAAAAGTTTTGCTATTTTTAAATCTATAGGAGATGTAATCTTTATATTTGAATAAGTTCCTTCAA
TAATCTTCACTTTCCAATTA

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFFRLKKGDLIDILAPGSFIDEDENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDLTRFEELEKAQNSKLIIFAKGGW
GSSRLLEKNPSWQHGLMLGFSDTCSLLLSKYSQGFIGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVADIRGIPLRGGKA
KGEIIVSNLTIATFLIGTDHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNDSSDLEWKDLLKN
CIIERLQEFDFPILFDLPIGHRSGNACIPLGYEATLNGDDGILSIDSPF

Sequences:

>Translated_289_residues
MFFRLKKGDLIDILAPGSFIDEDENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDLTRFEELEKAQNSKLIIFAKGGW
GSSRLLEKNPSWQHGLMLGFSDTCSLLLSKYSQGFIGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVADIRGIPLRGGKA
KGEIIVSNLTIATFLIGTDHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNDSSDLEWKDLLKN
CIIERLQEFDFPILFDLPIGHRSGNACIPLGYEATLNGDDGILSIDSPF
>Mature_289_residues
MFFRLKKGDLIDILAPGSFIDEDENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDLTRFEELEKAQNSKLIIFAKGGW
GSSRLLEKNPSWQHGLMLGFSDTCSLLLSKYSQGFIGSIHGPMVTGLFKEPEWSLERLRNLLFEGYVADIRGIPLRGGKA
KGEIIVSNLTIATFLIGTDHFPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNDSSDLEWKDLLKN
CIIERLQEFDFPILFDLPIGHRSGNACIPLGYEATLNGDDGILSIDSPF

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=290, Percent_Identity=26.2068965517241, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32498; Mature: 32498

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRLKKGDLIDILAPGSFIDEDENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDLTR
CEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCCCCHHHHCCCCCCCCHHH
FEELEKAQNSKLIIFAKGGWGSSRLLEKNPSWQHGLMLGFSDTCSLLLSKYSQGFIGSIH
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCC
GPMVTGLFKEPEWSLERLRNLLFEGYVADIRGIPLRGGKAKGEIIVSNLTIATFLIGTDH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEEECCC
FPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNDSSDLEWKDLLKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
CIIERLQEFDFPILFDLPIGHRSGNACIPLGYEATLNGDDGILSIDSPF
HHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEEECCCCCEEEECCCC
>Mature Secondary Structure
MFFRLKKGDLIDILAPGSFIDEDENFQKGIEILKNWGLEINENNSLSKKFGYFAGDDLTR
CEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCCCCHHHHCCCCCCCCHHH
FEELEKAQNSKLIIFAKGGWGSSRLLEKNPSWQHGLMLGFSDTCSLLLSKYSQGFIGSIH
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCC
GPMVTGLFKEPEWSLERLRNLLFEGYVADIRGIPLRGGKAKGEIIVSNLTIATFLIGTDH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEEECCC
FPDCKGKIIIFEDINEDIYKIDRMLTYLRMTKTLTEIAGIGFGSFSNDSSDLEWKDLLKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
CIIERLQEFDFPILFDLPIGHRSGNACIPLGYEATLNGDDGILSIDSPF
HHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]