Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695484
Identifier: 126695484
GI number: 126695484
Start: 135338
End: 135697
Strand: Reverse
Name: 126695484
Synonym: P9301_01461
Alternate gene names: NA
Gene position: 135697-135338 (Counterclockwise)
Preceding gene: 126695486
Following gene: 126695478
Centisome position: 8.26
GC content: 27.78
Gene sequence:
>360_bases ATGAAAAAAAAGTCTATTGTCTATTCAGATTTATCAAAAAAACAACTAGAAATTCTTAAAGAACTTTACATTCAAAAAAA AGTTGAATCGATGAGTCATCAAGAACTTAAACAATATGTATTAGAAATTATTTCCCATCAGATAAACGATACTATTGGCA AAGAAGAGGAAATGGAAGCATGGAGAGAAATGTCAGATTTCTTTGAAGAACAATTTGAAATAATTATCCTAGAAATACAA ACAAAATACATTGACGATAAAAACGTAATTGAAACAGAAATAGATTCTCAGAAGCAAAGAATAGAATTACTTGAAAGGAA TAATTTGGATCAAGAGAAAAAGGATATGTGGGATGACTAG
Upstream 100 bases:
>100_bases GCAATTTTCAAGTAGGAATTAGCTAAGTTTAATATTTTTAATTTCTCCAAAATGTTTGAAATTATAATTTTGTCTATATT AAAAAAAAATTTAAGTATCT
Downstream 100 bases:
>100_bases AGTTTCCTGAATGGTGTAATAATTCAAACGATATCAACAAAAAATATGTCTTAATTTAAAAATGAAAATCAAAGAACTTT TTTTCATTTTTGTGGTGAAT
Product: signal peptide binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKKKSIVYSDLSKKQLEILKELYIQKKVESMSHQELKQYVLEIISHQINDTIGKEEEMEAWREMSDFFEEQFEIIILEIQ TKYIDDKNVIETEIDSQKQRIELLERNNLDQEKKDMWDD
Sequences:
>Translated_119_residues MKKKSIVYSDLSKKQLEILKELYIQKKVESMSHQELKQYVLEIISHQINDTIGKEEEMEAWREMSDFFEEQFEIIILEIQ TKYIDDKNVIETEIDSQKQRIELLERNNLDQEKKDMWDD >Mature_119_residues MKKKSIVYSDLSKKQLEILKELYIQKKVESMSHQELKQYVLEIISHQINDTIGKEEEMEAWREMSDFFEEQFEIIILEIQ TKYIDDKNVIETEIDSQKQRIELLERNNLDQEKKDMWDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14502; Mature: 14502
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSIVYSDLSKKQLEILKELYIQKKVESMSHQELKQYVLEIISHQINDTIGKEEEMEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WREMSDFFEEQFEIIILEIQTKYIDDKNVIETEIDSQKQRIELLERNNLDQEKKDMWDD HHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure MKKKSIVYSDLSKKQLEILKELYIQKKVESMSHQELKQYVLEIISHQINDTIGKEEEMEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WREMSDFFEEQFEIIILEIQTKYIDDKNVIETEIDSQKQRIELLERNNLDQEKKDMWDD HHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA