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The map label for this gene is cbpA [C]

Identifier: 126695477

GI number: 126695477

Start: 129937

End: 130614

Strand: Reverse

Name: cbpA [C]

Synonym: P9301_01391

Alternate gene names: 126695477

Gene position: 130614-129937 (Counterclockwise)

Preceding gene: 126695478

Following gene: 126695475

Centisome position: 7.96

GC content: 28.47

Gene sequence:

>678_bases
ATGGAAAAAAATTTATATGAAGAATTAGGCCTCAAAAAAAATGCAACCAGAAGTCAAATCAAATCTTCATATCGCTCTTT
AGTAAAACAACATCATCCTGATAAGGGGGGGGAAAAAGAACGATTTCTGGCAATACAAAATGCCTGGGAGACTCTAAATG
ACCCTATCAAAAAAGAACAATATGATAGAAGTTTTGTCTCTTCCAGTTCATCATTTGATTCATTAAATGAAAATTGGGAA
AAAAAAATTAATTCAAAAAAATATAATTCGTCAATTAAAGACAAAGAAGTTGAAACATGGATTAAAGAAATTTACAGTCC
AATCAATAGATTAATTAGTCAAATAATTAAACCTTTGAACAACGAAATAAAAGAACTATCTGCGGATCCATATGATGACC
AACTAATGGAAAATTTCTGCAGTTACATAAATCTTTCACAAAAAAAAATAGAAAAAGTTGAAAAAATTTATAACAAAAAA
ATAGTTCCAAAGGCTATTTCAGCTTTAGGCCTTGATCTTTATCATTGTTTTTCACAAGTTAAAGATGCACTATCAGAGTT
TGATAGATATACACAAGGATATGTAGATAATTACTTATTTGATGGTAAGGAAATGATCAAAGAGGCAAAAAGAATCCAAT
CAAAGATGTCTACAGAGAAAAAAAATAAAAACTTTTAG

Upstream 100 bases:

>100_bases
CCAAGTTTTGGTGAAAGATATTTATCAACAGCAATGTTTGAATCTAATACTTCAATTCAAGCCAGAAAAGATGGTTATCT
CTAATCCATAATTTATAAAA

Downstream 100 bases:

>100_bases
ATACAAAACTTTATTGCAAATATTCTTTGAGTTGTTCTAATTTAAACCAAACATCTGGGACAGGTCTGCGCCATCGAATC
TGAGCATATTCGTCTTTGAC

Product: putative heat shock protein DnaJ

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone; DNAJ Domain Protein; DNAJ Domain-Containing Protein; Molecular Chaperone; DNAJ Family Protein; Heat Shock Protein DNAJ-Like Protein; DNAJ-Like Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEKNLYEELGLKKNATRSQIKSSYRSLVKQHHPDKGGEKERFLAIQNAWETLNDPIKKEQYDRSFVSSSSSFDSLNENWE
KKINSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCSYINLSQKKIEKVEKIYNKK
IVPKAISALGLDLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF

Sequences:

>Translated_225_residues
MEKNLYEELGLKKNATRSQIKSSYRSLVKQHHPDKGGEKERFLAIQNAWETLNDPIKKEQYDRSFVSSSSSFDSLNENWE
KKINSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCSYINLSQKKIEKVEKIYNKK
IVPKAISALGLDLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
>Mature_225_residues
MEKNLYEELGLKKNATRSQIKSSYRSLVKQHHPDKGGEKERFLAIQNAWETLNDPIKKEQYDRSFVSSSSSFDSLNENWE
KKINSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLNNEIKELSADPYDDQLMENFCSYINLSQKKIEKVEKIYNKK
IVPKAISALGLDLYHCFSQVKDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26463; Mature: 26463

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNLYEELGLKKNATRSQIKSSYRSLVKQHHPDKGGEKERFLAIQNAWETLNDPIKKEQ
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YDRSFVSSSSSFDSLNENWEKKINSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIKELSADPYDDQLMENFCSYINLSQKKIEKVEKIYNKKIVPKAISALGLDLYHCFSQV
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKNLYEELGLKKNATRSQIKSSYRSLVKQHHPDKGGEKERFLAIQNAWETLNDPIKKEQ
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YDRSFVSSSSSFDSLNENWEKKINSKKYNSSIKDKEVETWIKEIYSPINRLISQIIKPLN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIKELSADPYDDQLMENFCSYINLSQKKIEKVEKIYNKKIVPKAISALGLDLYHCFSQV
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KDALSEFDRYTQGYVDNYLFDGKEMIKEAKRIQSKMSTEKKNKNF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA