Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695454
Identifier: 126695454
GI number: 126695454
Start: 114880
End: 115815
Strand: Reverse
Name: 126695454
Synonym: P9301_01161
Alternate gene names: NA
Gene position: 115815-114880 (Counterclockwise)
Preceding gene: 126695456
Following gene: 126695451
Centisome position: 7.05
GC content: 32.26
Gene sequence:
>936_bases ATGTCCCTTAAGACTTTAAATAGAAGAAATAAAAAAGATTTGAAATGGCCAAAAATTATAATCGCAATCCTTAGCACTAT AGGCATAGTTGATACAGGTTCGATTACTTTAAAAAACTGGGGATTATTTACTTCGCTTTCATGCCCAGGGATACAAAATG GTTGTGAAACAGTTTTAAACAGTCCTTGGGGTACTTTATTTGAAAATAATCAAGTTAATATACCTCTCTCATTAGCTGGA TTTATAACATATTTATCAATATTATTTATCACAATAATACTCTCGCTTAATGTAATTTCCCCAAAAGAAAAACTAAATAA GTTTTTCTGGTGGCTAGTATTTCTAATTTCTTGTGCGTCATCAACATTTAGCTTTTTATTGATAAATATAATGTTTTTTA AGATTCAAGCATATTGCTTTTTTTGCATACTTTCAGCAATTTTATCGTTTTCTATCTTTATAATTTCTATGATTGGAGCA AAGTTCGAAAGTAGAGAACCTATGATTTTTAGAGGTTTCATTGTAGCCATTAGTGTACTGCTGGGAGGCCTAATTTGGTC AACAAGCGTTGACCCATCTAATGCTATTGATGTTGCAAACCCCACTGAAAATGTATCCCCAATAATTACCACTTCAAGCT CTCCCCAGAAAGTAAAGTTTGCAAAATTTTTAAGTGAAAACAATATTGTTATGTATAGTGCATACTGGTGCCCTCATTGC TACGATCAGAAACAATTATTTGGTAAAGAAGCAGTTAAAGAATTAAAAGTAGTTGAGTGTGCCAAAGATGGTAAAGATAA TGAGTATGAGCTGTGCCAAACGAAAGGAATCAGTGGATTTCCTTCTTGGGAAATAAATGGAGAAATTATTAGTGGTACGC GTTCCTTAAATGAATTAGCAACAAAAACCGACTATCAGGGAGATCTTAATTTTTAA
Upstream 100 bases:
>100_bases TAAAAAACAATAATTAAAAGATTTAAGCAGCATTTTTATATAACTATCATGCCAAGATAATATTAGGATAGATAATGTAA ATAACAAACTTTCTTTTTGT
Downstream 100 bases:
>100_bases TAAATCTTTTTTGAATTTTTTGATCTAACTGTTGTCTAGTATGGCATTCCCAATTTTTATCTTTATCAGGGAAATCATCT CTATAATGCCCTCCTCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSLKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGLFTSLSCPGIQNGCETVLNSPWGTLFENNQVNIPLSLAG FITYLSILFITIILSLNVISPKEKLNKFFWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISMIGA KFESREPMIFRGFIVAISVLLGGLIWSTSVDPSNAIDVANPTENVSPIITTSSSPQKVKFAKFLSENNIVMYSAYWCPHC YDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRSLNELATKTDYQGDLNF
Sequences:
>Translated_311_residues MSLKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGLFTSLSCPGIQNGCETVLNSPWGTLFENNQVNIPLSLAG FITYLSILFITIILSLNVISPKEKLNKFFWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISMIGA KFESREPMIFRGFIVAISVLLGGLIWSTSVDPSNAIDVANPTENVSPIITTSSSPQKVKFAKFLSENNIVMYSAYWCPHC YDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRSLNELATKTDYQGDLNF >Mature_310_residues SLKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGLFTSLSCPGIQNGCETVLNSPWGTLFENNQVNIPLSLAGF ITYLSILFITIILSLNVISPKEKLNKFFWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISMIGAK FESREPMIFRGFIVAISVLLGGLIWSTSVDPSNAIDVANPTENVSPIITTSSSPQKVKFAKFLSENNIVMYSAYWCPHCY DQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRSLNELATKTDYQGDLNF
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34813; Mature: 34682
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGLFTSLSCPGIQNGCETVLN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCCHHHHHHHC SPWGTLFENNQVNIPLSLAGFITYLSILFITIILSLNVISPKEKLNKFFWWLVFLISCAS CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH STFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISMIGAKFESREPMIFRGFIVAISVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LGGLIWSTSVDPSNAIDVANPTENVSPIITTSSSPQKVKFAKFLSENNIVMYSAYWCPHC HHHHHHCCCCCCCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC YDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRSLNELA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHH TKTDYQGDLNF HHCCCCCCCCC >Mature Secondary Structure SLKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGLFTSLSCPGIQNGCETVLN CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCCHHHHHHHC SPWGTLFENNQVNIPLSLAGFITYLSILFITIILSLNVISPKEKLNKFFWWLVFLISCAS CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH STFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISMIGAKFESREPMIFRGFIVAISVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LGGLIWSTSVDPSNAIDVANPTENVSPIITTSSSPQKVKFAKFLSENNIVMYSAYWCPHC HHHHHHCCCCCCCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC YDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRSLNELA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHH TKTDYQGDLNF HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA