Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695451
Identifier: 126695451
GI number: 126695451
Start: 110898
End: 112277
Strand: Reverse
Name: 126695451
Synonym: P9301_01131
Alternate gene names: NA
Gene position: 112277-110898 (Counterclockwise)
Preceding gene: 126695454
Following gene: 126695450
Centisome position: 6.84
GC content: 28.99
Gene sequence:
>1380_bases GTGTGGCAAGAAATTAATTTAACAGAAGATCCCATTGATCTTTTAGTTCCTAATATTACTTATAAAATAAACCCTGCGGA AATTGAAAGTATTGAAGCTAATTCTATTGCTGAAGAAATAGGATTTGAATCAGGTGATTCAATTATTAGTATTAACGGAA AAAAACCAAGAGATTTAATTGATTATCAGATTCTGATTAGTGAAGAAATTTTAGACATATCAGTTTTAGATAAAAATCAT GAAATTCACAATATAAATATTGAAAAAGATCAAGACGTTAATTTAGGTATAAATTTTAAAGATGCATTATTTGATTCAAT AAAGCAATGCAATAATAGATGTCCATTTTGTTTTATTGATCAACAGCCAAGTGGTAAAAGAAAAAGTCTATATATAAAAG ATGATGATTATAGATTAAGTTTCCTATATGGCTCTTATTTAACTCTTACGAATTTAAAAAAAGAAGACTGGGAAAGAATT GCTATGCAAAAACTATCCCCACTTTTTATTTCAGTTCATGCTACTGATCCCGCCATAAGAGAAAAATTATTAAAAAATAA AAAAGCAGGAGTGATACTTGATCAAATTTCTTGGTTTGAAAAAAACTCTATTCAAATACATGCTCAAATTGTTGTTTGTC CAGACATAAACGATGGAGATATTCTTGAGAAATCAATTTTGGAACTTGCTGAATTCTACAAAAAAAACTCTCAAACAGTA CTTTCAGTCGCAATAGTTCCTGTAGGACTTACAAAATTTAGACCTGAAAATGATGGATTGAAATCAATCAGCCCAGAATA CGCAAAAAAAACTATTAAACAAGTAGAGAGAATTCAAGCCTCTCTTCAAATTACTCTTGGGACTCGTTTTTGTTGGCTAG CAGACGAATGGTATTTAATTGCTGGTACAAATTTACCTAGTTACAAAACCTACGAAAATATGCCACAAGAATCTAATGGA GTTGGGACTATTAGAAACTTTCTAGAAGCATTAAGAGAAAAGACTCAAAACCTACCCCAAAAAGTAAAAAAGCCAAAAAA AGTTAGTTGGATTGTTGGTAAATTAGTGTATGAAGCCCTAATTCCCACAGTTAAGAAATTAAATTTAATTAATGGATTAA CAATTAATTTATATGGTTTGCCAAGTATTTATTGGGGTCAAGATCAAGTTGTTACAGGTCTTCTTACTGGAGAAGATCTA ATTTACGGGTTGAAAAATAAGGATTTAGGAGAAGCTGTTTACATACCATCTATTATGTTAAAAATTAATACTGATTTATT TTTAGATGATAAAAATATTCAAGAAGTTGAGACTCAAATAAATACTAAAATTCACGTTCTTGATGATTCAAATGATATTA TTAATACTTTGATTGGTTAA
Upstream 100 bases:
>100_bases TAATTTCACACCTATATTTAGTTTTTTAAAAGTATTTAATACACTTTGAGTCATATATAAGTTTAGAATAAATATAAACA AGAGTATTTGGCCTTAAATT
Downstream 100 bases:
>100_bases TCCAATATTTTCGAAATTATAAAAAATGCTTAGAAGAGTAATAAATCCTTTTTTATTATTACCACTTACTCTAAGTACGA ATACGTTTAATGTTCTATCG
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG
Sequences:
>Translated_459_residues MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG >Mature_459_residues MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52190; Mature: 52190
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCHHEEECCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKNHEIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFID CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEE QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPAIR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHH EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV HHHHCCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLI EEEEEEEECHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCEEEE AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEAL ECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH IPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEEECEEEE KINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG EECCEEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC >Mature Secondary Structure MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCHHEEECCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKNHEIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFID CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEE QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPAIR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHH EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV HHHHCCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLI EEEEEEEECHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCEEEE AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEAL ECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH IPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEEECEEEE KINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG EECCEEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA