Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126695451

Identifier: 126695451

GI number: 126695451

Start: 110898

End: 112277

Strand: Reverse

Name: 126695451

Synonym: P9301_01131

Alternate gene names: NA

Gene position: 112277-110898 (Counterclockwise)

Preceding gene: 126695454

Following gene: 126695450

Centisome position: 6.84

GC content: 28.99

Gene sequence:

>1380_bases
GTGTGGCAAGAAATTAATTTAACAGAAGATCCCATTGATCTTTTAGTTCCTAATATTACTTATAAAATAAACCCTGCGGA
AATTGAAAGTATTGAAGCTAATTCTATTGCTGAAGAAATAGGATTTGAATCAGGTGATTCAATTATTAGTATTAACGGAA
AAAAACCAAGAGATTTAATTGATTATCAGATTCTGATTAGTGAAGAAATTTTAGACATATCAGTTTTAGATAAAAATCAT
GAAATTCACAATATAAATATTGAAAAAGATCAAGACGTTAATTTAGGTATAAATTTTAAAGATGCATTATTTGATTCAAT
AAAGCAATGCAATAATAGATGTCCATTTTGTTTTATTGATCAACAGCCAAGTGGTAAAAGAAAAAGTCTATATATAAAAG
ATGATGATTATAGATTAAGTTTCCTATATGGCTCTTATTTAACTCTTACGAATTTAAAAAAAGAAGACTGGGAAAGAATT
GCTATGCAAAAACTATCCCCACTTTTTATTTCAGTTCATGCTACTGATCCCGCCATAAGAGAAAAATTATTAAAAAATAA
AAAAGCAGGAGTGATACTTGATCAAATTTCTTGGTTTGAAAAAAACTCTATTCAAATACATGCTCAAATTGTTGTTTGTC
CAGACATAAACGATGGAGATATTCTTGAGAAATCAATTTTGGAACTTGCTGAATTCTACAAAAAAAACTCTCAAACAGTA
CTTTCAGTCGCAATAGTTCCTGTAGGACTTACAAAATTTAGACCTGAAAATGATGGATTGAAATCAATCAGCCCAGAATA
CGCAAAAAAAACTATTAAACAAGTAGAGAGAATTCAAGCCTCTCTTCAAATTACTCTTGGGACTCGTTTTTGTTGGCTAG
CAGACGAATGGTATTTAATTGCTGGTACAAATTTACCTAGTTACAAAACCTACGAAAATATGCCACAAGAATCTAATGGA
GTTGGGACTATTAGAAACTTTCTAGAAGCATTAAGAGAAAAGACTCAAAACCTACCCCAAAAAGTAAAAAAGCCAAAAAA
AGTTAGTTGGATTGTTGGTAAATTAGTGTATGAAGCCCTAATTCCCACAGTTAAGAAATTAAATTTAATTAATGGATTAA
CAATTAATTTATATGGTTTGCCAAGTATTTATTGGGGTCAAGATCAAGTTGTTACAGGTCTTCTTACTGGAGAAGATCTA
ATTTACGGGTTGAAAAATAAGGATTTAGGAGAAGCTGTTTACATACCATCTATTATGTTAAAAATTAATACTGATTTATT
TTTAGATGATAAAAATATTCAAGAAGTTGAGACTCAAATAAATACTAAAATTCACGTTCTTGATGATTCAAATGATATTA
TTAATACTTTGATTGGTTAA

Upstream 100 bases:

>100_bases
TAATTTCACACCTATATTTAGTTTTTTAAAAGTATTTAATACACTTTGAGTCATATATAAGTTTAGAATAAATATAAACA
AGAGTATTTGGCCTTAAATT

Downstream 100 bases:

>100_bases
TCCAATATTTTCGAAATTATAAAAAATGCTTAGAAGAGTAATAAATCCTTTTTTATTATTACCACTTACTCTAAGTACGA
ATACGTTTAATGTTCTATCG

Product: putative Fe-S oxidoreductase

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH
EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI
AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV
LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG
VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL
IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG

Sequences:

>Translated_459_residues
MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH
EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI
AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV
LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG
VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL
IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG
>Mature_459_residues
MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH
EIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI
AMQKLSPLFISVHATDPAIREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV
LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG
VGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEALIPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDL
IYGLKNKDLGEAVYIPSIMLKINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52190; Mature: 52190

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI
CCCCCCCCCCCHHEEECCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH
DYQILISEEILDISVLDKNHEIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFID
CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEE
QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPAIR
CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHH
EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV
HHHHCCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE
LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLI
EEEEEEEECHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCEEEE
AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEAL
ECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH
IPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML
HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEEECEEEE
KINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG
EECCEEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC
>Mature Secondary Structure
MWQEINLTEDPIDLLVPNITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI
CCCCCCCCCCCHHEEECCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH
DYQILISEEILDISVLDKNHEIHNINIEKDQDVNLGINFKDALFDSIKQCNNRCPFCFID
CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEE
QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPAIR
CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHH
EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKNSQTV
HHHHCCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE
LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKQVERIQASLQITLGTRFCWLADEWYLI
EEEEEEEECHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCEEEE
AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKKPKKVSWIVGKLVYEAL
ECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH
IPTVKKLNLINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML
HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEEECEEEE
KINTDLFLDDKNIQEVETQINTKIHVLDDSNDIINTLIG
EECCEEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA